Detailed information NTG0160338

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: A4W81_RS03650
• Genome accession: NZ_CP016465
• Coordinates: 715679..718096 (+)
• Length: 805 a.a.
• NCBI ID: WP_112220967.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 710679..723096

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W81_RS03620 (A4W81_03580)	recN	710994..712696 (+)	1703	Protein_690	DNA repair protein RecN	-
A4W81_RS03625 (A4W81_03585)	-	712755..713078 (-)	324	WP_056948330.1	hypothetical protein	-
A4W81_RS03630 (A4W81_03590)	-	713201..713425 (+)	225	WP_076632161.1	PC4/YdbC family ssDNA-binding protein	-
A4W81_RS03635 (A4W81_03595)	gmk	713498..714109 (+)	612	WP_011374394.1	guanylate kinase	-
A4W81_RS03640 (A4W81_03600)	rpoZ	714114..714371 (+)	258	WP_011374395.1	DNA-directed RNA polymerase subunit omega	-
A4W81_RS03645 (A4W81_03605)	coaBC	714460..715677 (+)	1218	WP_011374396.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
A4W81_RS03650 (A4W81_03610)	priA	715679..718096 (+)	2418	WP_112220967.1	primosomal protein N'	Machinery gene
A4W81_RS03655 (A4W81_03615)	fmt	718116..719072 (+)	957	WP_076632158.1	methionyl-tRNA formyltransferase	-
A4W81_RS03660 (A4W81_03620)	rsmB	719062..720405 (+)	1344	WP_076632157.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
A4W81_RS03665 (A4W81_03625)	-	720427..721173 (+)	747	WP_025015868.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
A4W81_RS03670 (A4W81_03630)	pknB	721170..723053 (+)	1884	WP_011374401.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator

Sequence

Protein

• Length: 805 a.a.
• Molecular weight: 90657.15 Da
• Isoelectric Point: 7.6718

>NTDB_id=160338 A4W81_RS03650 WP_112220967.1 715679..718096(+) (priA) [Latilactobacillus sakei strain TMW 1.3]
MPQIAKVIVDVPTMQTNRPYDYQVPVTLVDVIQPGMRVIIPFGNGDRKIQGFVLQVLDQPSFTGQLKAIEAVVDLTPAVN
PELLSLSDWLAQQTYAFQITCLQTMLPSVMRAKYTKTATLTDEIPTDLQASLFNGNDELTFDQNLVPDKLKQLMQLQRQG
KISVTYHVDNRAQVKQLTAIEPALSFEQLEEARMGLRKSAQKQSQLISYLQTLIDQEAPTLLKTILEKTTFTRENIRIGA
EKGWLRQVKVEAYRNPYANAVQPTHKMTLTSEQETAVDAVVQSASTDASEVFLIEGVTGSGKTEVYLQTIDAVLQQGKTA
LMLVPEIALTPQMVQRVKGRFGDLVAVLHSGLSEGEKYDEWRRIERKEARVVVGARSAVFAPLEDIGVIIMDEEHEASYK
QDESPRYHARDVAIWRSQYHNCPVILGSATPSLESRARAQKDVYHLIRLTQRVNQQALPAVELVDMREAMRVQKASNFSP
ALLAGIKERMQKGEQSVLLLNRRGFSSFIMCRDCGFVLQCPNCDISLTLHMDTHSMKCHYCGHEEAIPKICPSCQSRQIR
YFGTGTQKVEAELQELIPEARILRMDVDTTRKKGAHAKLLKKFGDHEADILLGTQMIAKGLDFPDVTLVGVINADTALGL
PDFRASERTFQLLTQVSGRAGRADKVGQVIVQSYNPENYAIQFAKQHDYEGFYQYEMAVRYRGGYPPYYFTVKVTVSHPE
EALAAKKSFQIAKQMRPILSDQALILGPTPKSIARINNRYFYQIVIKYKQEPQLQAKLAEILETTQIDTRHGFKIGLDNE
PLQFT

Nucleotide

• Length: 2418 bp

>NTDB_id=160338 A4W81_RS03650 WP_112220967.1 715679..718096(+) (priA) [Latilactobacillus sakei strain TMW 1.3]
ATGCCACAGATTGCTAAAGTAATCGTTGATGTGCCGACAATGCAAACTAATCGGCCATATGATTATCAGGTACCGGTCAC
TTTAGTTGATGTCATTCAACCTGGGATGCGGGTTATTATTCCGTTTGGAAATGGCGATCGTAAGATTCAGGGCTTTGTCT
TGCAAGTTTTAGACCAGCCAAGCTTTACGGGCCAATTAAAGGCAATCGAGGCAGTTGTTGATTTAACGCCAGCGGTTAAC
CCTGAATTACTATCACTTTCGGATTGGTTAGCACAACAGACGTATGCTTTTCAGATCACGTGTCTGCAGACGATGTTACC
CAGTGTGATGCGGGCTAAATATACGAAAACTGCGACGTTAACTGATGAAATTCCAACGGACTTACAGGCCAGTCTGTTCA
ATGGCAATGATGAGTTGACTTTTGATCAGAATCTGGTGCCTGATAAGTTAAAACAACTCATGCAATTGCAACGCCAAGGT
AAAATTAGCGTCACTTATCACGTTGACAACCGGGCACAAGTTAAGCAATTAACGGCGATTGAGCCCGCACTGAGTTTTGA
ACAATTGGAAGAAGCACGGATGGGTTTACGAAAGTCAGCCCAGAAGCAAAGCCAATTAATCAGTTATCTGCAAACGCTGA
TTGATCAAGAGGCACCGACTTTATTAAAAACGATTTTAGAAAAAACAACTTTTACGCGGGAAAATATTCGAATCGGTGCG
GAAAAAGGCTGGTTACGCCAAGTTAAGGTGGAAGCTTACCGGAATCCGTACGCTAATGCTGTTCAACCAACCCACAAAAT
GACGCTAACGAGCGAACAAGAAACCGCAGTTGATGCGGTCGTTCAATCCGCATCAACGGATGCCTCAGAAGTATTCTTAA
TTGAAGGTGTCACTGGCAGTGGGAAGACCGAAGTTTATTTACAAACAATTGATGCCGTCTTGCAACAAGGGAAGACCGCA
CTGATGTTAGTTCCTGAAATTGCCTTGACGCCGCAGATGGTGCAACGCGTGAAGGGCCGCTTTGGTGATTTAGTCGCTGT
GTTACATAGTGGCTTGTCTGAAGGCGAAAAATACGACGAATGGCGGCGCATAGAACGCAAAGAAGCGCGCGTGGTCGTCG
GTGCCCGCTCAGCCGTTTTTGCGCCACTTGAAGATATCGGCGTGATTATTATGGACGAAGAACATGAAGCCAGTTATAAG
CAAGACGAAAGTCCCCGTTATCATGCACGCGACGTTGCGATTTGGCGGAGTCAGTATCATAACTGCCCGGTCATTTTAGG
TAGCGCCACACCATCGTTAGAATCCCGGGCTCGGGCGCAAAAAGATGTCTACCATCTGATTCGCCTGACGCAACGGGTGA
ACCAACAAGCCTTACCAGCTGTTGAACTAGTTGATATGCGCGAAGCGATGAGGGTTCAAAAAGCCAGCAACTTTTCACCG
GCGTTATTAGCCGGCATCAAAGAACGGATGCAAAAGGGCGAACAAAGTGTGTTACTCCTAAATCGTCGCGGTTTTTCATC
ATTTATCATGTGTCGGGATTGCGGGTTTGTCTTGCAGTGTCCCAACTGTGATATTTCGTTGACGTTACACATGGATACGC
ATTCGATGAAATGCCATTATTGTGGGCACGAAGAAGCCATTCCTAAGATTTGCCCCAGCTGTCAGAGTCGTCAAATTCGC
TATTTTGGGACTGGCACGCAAAAAGTCGAAGCTGAATTACAAGAATTAATCCCTGAAGCACGGATCTTGCGGATGGACGT
TGATACGACTCGGAAAAAAGGCGCGCATGCTAAATTATTGAAAAAATTTGGTGATCACGAAGCTGATATCTTATTAGGGA
CGCAGATGATTGCCAAGGGCCTAGATTTCCCAGATGTAACGTTAGTCGGGGTGATCAACGCTGATACTGCTTTGGGTTTA
CCGGATTTTCGGGCGAGTGAGCGGACTTTCCAATTATTAACGCAGGTTAGTGGTCGTGCGGGTCGTGCAGATAAGGTGGG
GCAAGTGATTGTTCAATCTTATAATCCCGAGAATTACGCGATTCAATTTGCCAAGCAGCACGATTATGAAGGCTTTTATC
AATATGAAATGGCGGTGCGCTACCGTGGCGGCTATCCGCCTTATTACTTTACGGTGAAGGTGACGGTTAGCCACCCTGAA
GAAGCACTTGCCGCAAAGAAGAGTTTTCAAATTGCCAAACAGATGCGACCGATTTTATCCGACCAAGCACTGATTCTCGG
GCCCACCCCGAAATCAATTGCTCGGATTAATAATCGTTATTTTTACCAAATTGTGATTAAATATAAACAGGAACCACAAC
TTCAGGCTAAATTAGCCGAAATACTAGAGACCACCCAAATCGATACTCGTCACGGGTTTAAGATTGGGCTGGATAATGAA
CCTCTACAATTTACTTAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (561-663)

• Type III restriction enzyme, res subunit (ResIII) (266-432)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (520-545)

• Primosomal protein N C-terminal domain (PriA_C) (707-801)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (6-107)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	51.911	100	0.523