Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   APQ97_RS00005 Genome accession   NZ_CP012911
Coordinates   2284720..252 (+) Length   255 a.a.
NCBI ID   WP_004194534.1    Uniprot ID   A0A126UJW8
Organism   Streptococcus suis strain NSUI060     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2279720..5252
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - spo0J 2284720..252 (+) -2284467 - - Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 28993.28 Da        Isoelectric Point: 9.4760

>NTDB_id=158188 APQ97_RS00005 WP_004194534.1 2284720..252(+) (spo0J) [Streptococcus suis strain NSUI060]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRINF
NDLDEFERIINNFK

Nucleotide


Download         Length: 0 bp        

>NTDB_id=158188 APQ97_RS00005 WP_004194534.1 2284720..252(+) (spo0J) [Streptococcus suis strain NSUI060]

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-94)

HTH domain found in ParB protein (HTH_ParB)

(146-193)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A126UJW8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.762

99.213

0.543

Multiple sequence alignment