Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   SanJ4211_RS07795 Genome accession   NZ_CP012805
Coordinates   1542974..1544740 (-) Length   588 a.a.
NCBI ID   WP_021002022.1    Uniprot ID   A0A1S1FDH2
Organism   Streptococcus anginosus strain J4211     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1537974..1549740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS07775 (SanJ4211_1537) - 1538851..1540248 (+) 1398 WP_021002018.1 glycoside hydrolase family 1 protein -
  SanJ4211_RS07780 (SanJ4211_1538c) - 1540382..1540702 (-) 321 WP_021002019.1 PTS cellobiose transporter subunit IIA -
  SanJ4211_RS07785 (SanJ4211_1539c) - 1540713..1541027 (-) 315 WP_021002020.1 PTS cellobiose transporter subunit IIB -
  SanJ4211_RS07790 (SanJ4211_1540c) rcrQ 1541224..1542984 (-) 1761 WP_021002021.1 ABC transporter ATP-binding protein Regulator
  SanJ4211_RS07795 (SanJ4211_1541c) rcrP 1542974..1544740 (-) 1767 WP_021002022.1 ABC transporter ATP-binding protein Regulator
  SanJ4211_RS07800 (SanJ4211_1542c) - 1544733..1545191 (-) 459 WP_003039423.1 MarR family winged helix-turn-helix transcriptional regulator -
  SanJ4211_RS07805 (SanJ4211_1543c) - 1545349..1545759 (-) 411 WP_021002023.1 peptide deformylase -
  SanJ4211_RS07810 (SanJ4211_1544c) scrK 1545826..1546725 (-) 900 WP_021002024.1 fructokinase ScrK -
  SanJ4211_RS07815 (SanJ4211_1545c) - 1547005..1548903 (-) 1899 WP_021002025.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65244.10 Da        Isoelectric Point: 6.8922

>NTDB_id=157717 SanJ4211_RS07795 WP_021002022.1 1542974..1544740(-) (rcrP) [Streptococcus anginosus strain J4211]
MVKLFKRLTVKEVGMIVISILFTCLTVYLELEVPTYISKITELLQMRGTVVSDLWDPGLKMIGLSFASFLSAVTVGFIAA
RLAASFTTSLRSDIFNRVLDYSDAEIKRFSIPSLLTRTTNDLTQIQLMITMGLQVVTRGPIMAIWAITKIIGKSEYWLWA
VIVAVIVNMIMTTVLMTLAFPKQSVIQRLTDKLNSITRESLTGIRVVRAYNAEDYQDDKFAGANAEVTRLNLFVSRLMAI
LNPIMMGISSGLTLAIYWIGAYLIQDAVLPGRLPIFSDMVVFMSYAMQVVMGFMLMAALFIVLPRTLVSAGRINEVLDLY
STIESPTEPKIAKDVKGEVVFDNVSFRYTKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLISLIPRFYDVTEGKILVD
GVNVKDYQLEDLHNKIGYIPQKAVLFSGDIKSNLDFGQSNESPLDNEKMWSALDLAQAKSFVEEKEGGLHSEVAQSGTNF
SGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILREELAKKVKDTTRLIVAQRISTIMDADQILVLDKGKVVGQGT
HKELLATNAVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=157717 SanJ4211_RS07795 WP_021002022.1 1542974..1544740(-) (rcrP) [Streptococcus anginosus strain J4211]
ATGGTTAAATTGTTTAAACGTTTAACTGTCAAAGAAGTAGGGATGATTGTCATCAGTATCTTGTTTACTTGTTTAACAGT
TTATTTGGAATTAGAGGTTCCAACTTATATTTCAAAAATTACGGAACTCCTACAGATGAGGGGGACAGTAGTTTCTGATT
TGTGGGATCCAGGTTTGAAAATGATTGGGCTGTCTTTTGCGAGCTTTCTTAGTGCTGTGACAGTTGGCTTTATTGCGGCT
AGGTTGGCGGCTAGCTTTACAACGAGTTTGCGGTCAGATATTTTCAATCGTGTACTGGATTATTCAGACGCTGAGATTAA
GCGATTCTCTATTCCGAGTCTTTTGACGCGGACAACCAACGATCTTACGCAAATTCAGCTCATGATTACCATGGGCTTGC
AAGTTGTGACGCGTGGGCCAATCATGGCGATTTGGGCGATTACGAAAATCATTGGGAAATCAGAATACTGGCTCTGGGCA
GTTATTGTTGCAGTTATTGTGAATATGATTATGACGACAGTTTTGATGACGTTGGCCTTTCCAAAGCAATCTGTTATTCA
ACGGTTGACTGATAAGTTAAATAGTATTACGCGTGAAAGTCTAACAGGGATTCGTGTTGTTCGAGCTTACAATGCTGAAG
ACTATCAAGATGATAAATTTGCAGGGGCAAATGCTGAAGTGACTCGGTTGAATCTCTTTGTTAGTCGGCTCATGGCTATT
TTAAATCCAATTATGATGGGGATTTCGAGTGGTTTGACCTTGGCAATATACTGGATTGGTGCTTACTTGATTCAAGATGC
AGTTTTACCAGGACGTTTGCCAATCTTTAGCGACATGGTTGTCTTTATGTCTTATGCTATGCAGGTCGTAATGGGCTTCA
TGCTCATGGCTGCTCTGTTTATCGTTCTTCCTCGTACCTTGGTGTCTGCCGGACGGATCAATGAAGTGCTTGATTTATAT
TCAACGATTGAGTCTCCAACAGAGCCAAAAATAGCGAAAGATGTCAAAGGGGAAGTGGTATTTGACAATGTTTCTTTCCG
CTATACTAAAAACTCTGAGGCTGTCATTGAACATGTTAGCTTTACAGCTAAAGCGGGCGAAACGGTAGCTTTCATCGGAT
CAACTGGTTCTGGGAAATCAACCCTAATTAGTTTAATTCCTCGTTTCTATGATGTGACAGAAGGAAAAATTTTAGTAGAT
GGCGTAAACGTCAAAGATTATCAGTTGGAAGATTTGCATAATAAAATTGGCTACATTCCACAAAAAGCTGTTCTTTTCTC
TGGTGATATCAAGAGTAATTTAGATTTTGGACAAAGCAATGAAAGTCCATTGGATAATGAAAAAATGTGGTCTGCGTTGG
ACTTGGCACAAGCGAAATCATTTGTTGAAGAAAAAGAAGGTGGTCTGCACTCAGAGGTCGCACAAAGCGGAACCAATTTC
TCTGGTGGTCAAAAGCAGCGGCTGGCGATTGCGCGTGCACTTGCTAGGAAACCTGAAATTCTGATTTTTGACGATTCATT
TTCAGCACTGGACTATAAGACAGACCGTATTTTGCGAGAAGAATTGGCGAAAAAAGTGAAGGATACAACTAGATTGATTG
TGGCGCAACGGATTTCAACGATTATGGATGCCGATCAGATTTTGGTACTGGATAAAGGAAAAGTAGTCGGTCAGGGTACT
CATAAAGAATTGCTGGCAACGAACGCAGTTTATCAAGAAATTGCTTATTCACAATTATCGAAGGAGGAATTGGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(357-506)

ABC transporter transmembrane region (ABC_membrane)

(17-291)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1S1FDH2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

70

100

0.714

Multiple sequence alignment