Detailed information NTG0155605

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: AMD33_RS02955
• Genome accession: NZ_CP012588
• Coordinates: 565895..566776 (+)
• Length: 293 a.a.
• NCBI ID: WP_011681210.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain MN-BM-A01
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 560895..571776

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AMD33_RS02925	-	561905..562357 (+)	453	WP_050983521.1	hypothetical protein	-
AMD33_RS02930	-	562347..562850 (+)	504	WP_224102963.1	DUF4832 domain-containing protein	-
AMD33_RS02935 (AMD33_02925)	galE	562865..563878 (+)	1014	WP_014727437.1	UDP-glucose 4-epimerase GalE	-
AMD33_RS02940 (AMD33_02930)	-	564066..564302 (+)	237	WP_002946959.1	DUF1146 family protein	-
AMD33_RS02945 (AMD33_02935)	murA	564372..565643 (+)	1272	WP_014608377.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
AMD33_RS02950 (AMD33_02940)	-	565645..565833 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
AMD33_RS02955 (AMD33_02945)	endA	565895..566776 (+)	882	WP_011681210.1	DNA/RNA non-specific endonuclease	Machinery gene
AMD33_RS02960 (AMD33_02950)	-	566848..567498 (-)	651	WP_014608375.1	amino acid ABC transporter permease	-
AMD33_RS02965 (AMD33_02955)	-	567510..568208 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
AMD33_RS02970 (AMD33_02960)	-	568226..569059 (-)	834	WP_014608373.1	transporter substrate-binding domain-containing protein	-
AMD33_RS02975 (AMD33_02965)	-	569071..569838 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
AMD33_RS02980 (AMD33_02970)	vicR	570365..571072 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31773.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=155605 AMD33_RS02955 WP_011681210.1 565895..566776(+) (endA) [Streptococcus thermophilus strain MN-BM-A01]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=155605 AMD33_RS02955 WP_011681210.1 565895..566776(+) (endA) [Streptococcus thermophilus strain MN-BM-A01]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTAGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594