Detailed information
Bioinformatically predicted
Overview
| Name | codY | Type | Regulator |
| Locus tag | ACN91_RS08815 | Genome accession | NZ_CP012483 |
| Coordinates | 1661251..1662030 (+) | Length | 259 a.a. |
| NCBI ID | WP_000421290.1 | Uniprot ID | A0A9W5VKA1 |
| Organism | Bacillus cereus strain NJ-W | ||
| Function | repression of comK (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1616839..1669097 | 1661251..1662030 | within | 0 |
Gene organization within MGE regions
Location: 1616839..1669097
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACN91_RS08600 (ACN91_08605) | rpoZ | 1617176..1617388 (+) | 213 | WP_000933961.1 | DNA-directed RNA polymerase subunit omega | - |
| ACN91_RS08605 (ACN91_08610) | coaBC | 1617561..1618766 (+) | 1206 | WP_053563755.1 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC | - |
| ACN91_RS08610 (ACN91_08615) | priA | 1618763..1621168 (+) | 2406 | WP_016512383.1 | primosomal protein N' | - |
| ACN91_RS08615 (ACN91_08620) | def | 1621180..1621650 (+) | 471 | WP_000279455.1 | peptide deformylase | - |
| ACN91_RS08620 (ACN91_08625) | fmt | 1621674..1622618 (+) | 945 | WP_000598805.1 | methionyl-tRNA formyltransferase | - |
| ACN91_RS08625 (ACN91_08630) | rsmB | 1622615..1623949 (+) | 1335 | WP_001249664.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| ACN91_RS08630 (ACN91_08635) | rlmN | 1623954..1625042 (+) | 1089 | WP_000450550.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| ACN91_RS08635 (ACN91_08640) | - | 1625047..1625799 (+) | 753 | WP_000648708.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| ACN91_RS08640 (ACN91_08645) | pknB | 1625808..1627781 (+) | 1974 | WP_000904746.1 | Stk1 family PASTA domain-containing Ser/Thr kinase | - |
| ACN91_RS08645 (ACN91_08650) | rsgA | 1628047..1628928 (+) | 882 | WP_001113932.1 | ribosome small subunit-dependent GTPase A | - |
| ACN91_RS08650 (ACN91_08655) | rpe | 1628931..1629575 (+) | 645 | WP_000589974.1 | ribulose-phosphate 3-epimerase | - |
| ACN91_RS08655 (ACN91_08660) | - | 1629645..1630325 (+) | 681 | WP_000752665.1 | thiamine diphosphokinase | - |
| ACN91_RS08660 (ACN91_08665) | spoVM | 1630392..1630472 (+) | 81 | WP_001213599.1 | stage V sporulation protein SpoVM | - |
| ACN91_RS08665 (ACN91_08670) | rpmB | 1630546..1630734 (-) | 189 | WP_000124776.1 | 50S ribosomal protein L28 | - |
| ACN91_RS08670 (ACN91_08675) | - | 1631111..1631473 (+) | 363 | WP_000021109.1 | Asp23/Gls24 family envelope stress response protein | - |
| ACN91_RS08675 (ACN91_08680) | - | 1631496..1633172 (+) | 1677 | WP_000027131.1 | DAK2 domain-containing protein | - |
| ACN91_RS08680 (ACN91_08685) | recG | 1633463..1635511 (+) | 2049 | WP_053563756.1 | ATP-dependent DNA helicase RecG | - |
| ACN91_RS08685 (ACN91_08690) | fapR | 1635600..1636193 (+) | 594 | WP_000747349.1 | transcription factor FapR | - |
| ACN91_RS08690 (ACN91_08695) | plsX | 1636190..1637182 (+) | 993 | WP_000684100.1 | phosphate acyltransferase PlsX | - |
| ACN91_RS08695 (ACN91_08700) | fabD | 1637197..1638141 (+) | 945 | WP_053563757.1 | ACP S-malonyltransferase | - |
| ACN91_RS08700 (ACN91_08705) | fabG | 1638141..1638881 (+) | 741 | WP_000911769.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| ACN91_RS08705 (ACN91_08710) | acpP | 1638951..1639184 (+) | 234 | WP_000786062.1 | acyl carrier protein | - |
| ACN91_RS08710 (ACN91_08715) | rncS | 1639243..1639980 (+) | 738 | WP_001146875.1 | ribonuclease III | - |
| ACN91_RS08715 (ACN91_08720) | smc | 1640128..1643697 (+) | 3570 | WP_053563758.1 | chromosome segregation protein SMC | - |
| ACN91_RS08720 (ACN91_08725) | ftsY | 1643713..1644702 (+) | 990 | WP_000007642.1 | signal recognition particle-docking protein FtsY | - |
| ACN91_RS08725 (ACN91_08730) | - | 1644835..1645167 (+) | 333 | WP_000891062.1 | putative DNA-binding protein | - |
| ACN91_RS08730 (ACN91_08735) | ffh | 1645180..1646529 (+) | 1350 | WP_000863460.1 | signal recognition particle protein | - |
| ACN91_RS08735 (ACN91_08740) | rpsP | 1646631..1646903 (+) | 273 | WP_000268750.1 | 30S ribosomal protein S16 | - |
| ACN91_RS08740 (ACN91_08745) | - | 1646918..1647145 (+) | 228 | WP_000737399.1 | KH domain-containing protein | - |
| ACN91_RS08745 (ACN91_08750) | rimM | 1647266..1647781 (+) | 516 | WP_000170272.1 | ribosome maturation factor RimM | - |
| ACN91_RS08750 (ACN91_08755) | trmD | 1647781..1648515 (+) | 735 | WP_000686899.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACN91_RS08755 (ACN91_08760) | rplS | 1648662..1649006 (+) | 345 | WP_001186516.1 | 50S ribosomal protein L19 | - |
| ACN91_RS08760 (ACN91_08765) | lepB | 1649108..1649659 (+) | 552 | WP_000711852.1 | signal peptidase I | - |
| ACN91_RS08765 (ACN91_08770) | ylqF | 1649680..1650570 (+) | 891 | WP_000236702.1 | ribosome biogenesis GTPase YlqF | - |
| ACN91_RS08770 (ACN91_08775) | - | 1650627..1651400 (+) | 774 | WP_001194269.1 | ribonuclease HII | - |
| ACN91_RS08775 (ACN91_08780) | sucC | 1651594..1652754 (+) | 1161 | WP_001020790.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| ACN91_RS08780 (ACN91_08785) | sucD | 1652774..1653676 (+) | 903 | WP_000115178.1 | succinate--CoA ligase subunit alpha | - |
| ACN91_RS08785 (ACN91_08790) | dprA | 1653764..1654633 (+) | 870 | WP_000818046.1 | DNA-processing protein DprA | - |
| ACN91_RS08790 (ACN91_08795) | topA | 1654778..1656856 (+) | 2079 | WP_001286955.1 | type I DNA topoisomerase | - |
| ACN91_RS08795 (ACN91_08800) | trmFO | 1656905..1658209 (+) | 1305 | WP_000213006.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| ACN91_RS08800 (ACN91_08805) | xerC | 1658275..1659174 (+) | 900 | WP_053563759.1 | tyrosine recombinase XerC | - |
| ACN91_RS08805 (ACN91_08810) | hslV | 1659217..1659759 (+) | 543 | WP_000526274.1 | ATP-dependent protease proteolytic subunit HslV | - |
| ACN91_RS08810 (ACN91_08815) | hslU | 1659782..1661173 (+) | 1392 | WP_000550085.1 | ATP-dependent protease ATPase subunit HslU | - |
| ACN91_RS08815 (ACN91_08820) | codY | 1661251..1662030 (+) | 780 | WP_000421290.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| ACN91_RS08820 (ACN91_08825) | rpsB | 1662379..1663080 (+) | 702 | WP_000111485.1 | 30S ribosomal protein S2 | - |
| ACN91_RS08825 (ACN91_08830) | tsf | 1663184..1664071 (+) | 888 | WP_016080531.1 | translation elongation factor Ts | - |
| ACN91_RS08830 (ACN91_08835) | pyrH | 1664138..1664860 (+) | 723 | WP_000042669.1 | UMP kinase | - |
| ACN91_RS08835 (ACN91_08840) | frr | 1664863..1665420 (+) | 558 | WP_000531505.1 | ribosome recycling factor | - |
| ACN91_RS08840 (ACN91_08845) | uppS | 1665506..1666282 (+) | 777 | WP_000971296.1 | isoprenyl transferase | - |
| ACN91_RS08845 (ACN91_08850) | cdsA | 1666300..1667091 (+) | 792 | WP_000813592.1 | phosphatidate cytidylyltransferase | - |
| ACN91_RS08850 (ACN91_08855) | dxr | 1667115..1668257 (+) | 1143 | WP_000790379.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
Sequence
Protein
Download Length: 259 a.a. Molecular weight: 28793.05 Da Isoelectric Point: 4.7165
>NTDB_id=154707 ACN91_RS08815 WP_000421290.1 1661251..1662030(+) (codY) [Bacillus cereus strain NJ-W]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENRELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLQELAKLKTN
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENRELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLQELAKLKTN
Nucleotide
Download Length: 780 bp
>NTDB_id=154707 ACN91_RS08815 WP_000421290.1 1661251..1662030(+) (codY) [Bacillus cereus strain NJ-W]
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGGAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCAAACGTATTCGTAGTTAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAAAACGAACGCATGAAGCAAATGCTTGCAGAACGTCAATTCCCAGAAGAATATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTGAACAGTGCGTACACAGCATTCCCGGTAGAAAACAGAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGTGGTGAGCGTCTAGGTACATTAGTATTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGACGATTTAATCCTTGCTGAGTACAGCTCAACTGTTGTAGGCATGGAAATCTTACGTGAAAAAGCAGAA
GAAATCGAAGAGGAAGCACGTAGTAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAGTTAGAAGCAAT
TGAGCATATCTTCGAAGAATTAAATGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGATCGTGTAGGAATTACTC
GTTCTGTAATCGTAAATGCACTACGTAAATTAGAAAGTGCTGGTGTAATTGAGTCTCGCTCTTTAGGTATGAAAGGAACA
TACATTAAAGTGCTAAACGACAAGTTTCTACAGGAACTTGCTAAATTAAAAACAAACTAA
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGGAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCAAACGTATTCGTAGTTAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAAAACGAACGCATGAAGCAAATGCTTGCAGAACGTCAATTCCCAGAAGAATATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTGAACAGTGCGTACACAGCATTCCCGGTAGAAAACAGAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGTGGTGAGCGTCTAGGTACATTAGTATTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGACGATTTAATCCTTGCTGAGTACAGCTCAACTGTTGTAGGCATGGAAATCTTACGTGAAAAAGCAGAA
GAAATCGAAGAGGAAGCACGTAGTAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAGTTAGAAGCAAT
TGAGCATATCTTCGAAGAATTAAATGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGATCGTGTAGGAATTACTC
GTTCTGTAATCGTAAATGCACTACGTAAATTAGAAAGTGCTGGTGTAATTGAGTCTCGCTCTTTAGGTATGAAAGGAACA
TACATTAAAGTGCTAAACGACAAGTTTCTACAGGAACTTGCTAAATTAAAAACAAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| codY | Bacillus subtilis subsp. subtilis str. 168 |
81.467 |
100 |
0.815 |
| codY | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.667 |
98.456 |
0.459 |