Detailed information NTG0154645

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: AMR71_RS07325
• Genome accession: NZ_CP012482
• Coordinates: 1442611..1444995 (+)
• Length: 794 a.a.
• NCBI ID: WP_057079263.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain NJ-V2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1437611..1449995

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AMR71_RS07305 (AMR71_07305)	cymR	1439083..1439502 (+)	420	WP_008342713.1	cysteine metabolism transcriptional regulator CymR	-
AMR71_RS07310 (AMR71_07310)	-	1439521..1440663 (+)	1143	WP_057079261.1	cysteine desulfurase family protein	-
AMR71_RS07315 (AMR71_07315)	mnmA	1440758..1441876 (+)	1119	WP_008342709.1	tRNA 2-thiouridine(34) synthase MnmA	-
AMR71_RS07320 (AMR71_07320)	-	1441938..1442591 (+)	654	WP_057079262.1	tetratricopeptide repeat protein	-
AMR71_RS07325 (AMR71_07325)	recD2	1442611..1444995 (+)	2385	WP_057079263.1	ATP-dependent RecD-like DNA helicase	Machinery gene
AMR71_RS07330 (AMR71_07330)	-	1445282..1445743 (+)	462	WP_046344105.1	PRC-barrel domain-containing protein	-
AMR71_RS07335 (AMR71_07335)	-	1445757..1445948 (+)	192	WP_003216308.1	hypothetical protein	-
AMR71_RS19395	-	1445969..1446100 (+)	132	WP_008362324.1	YrzQ family protein	-
AMR71_RS07340 (AMR71_07340)	-	1446139..1446789 (-)	651	WP_017367699.1	amino acid ABC transporter permease	-
AMR71_RS07345 (AMR71_07345)	-	1446805..1447458 (-)	654	WP_057079264.1	amino acid ABC transporter permease	-
AMR71_RS07350 (AMR71_07350)	-	1447539..1448348 (-)	810	WP_008342689.1	transporter substrate-binding domain-containing protein	-
AMR71_RS07355 (AMR71_07355)	-	1448363..1449091 (-)	729	WP_007501456.1	amino acid ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 88945.33 Da
• Isoelectric Point: 5.0173

>NTDB_id=154645 AMR71_RS07325 WP_057079263.1 1442611..1444995(+) (recD2) [Bacillus altitudinis strain NJ-V2]
MQEHPDQMKLEDEPFLKGTVQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGKLGNQTLHQIMRDPSVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPDRIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKDMIIEDERCYHPSLFYAEQSVAKRIQKIVAQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPGDYKKDE
AFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEDQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASQAIPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSSDQMKEVI
EKVVSNAAQKGYSAKDIQVLAPMYKGKAGINELNKMLQQILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLTETEEVMDAELAALQKELPFSVHDANIGMEGITPFDFMQE

Nucleotide

• Length: 2385 bp

>NTDB_id=154645 AMR71_RS07325 WP_057079263.1 1442611..1444995(+) (recD2) [Bacillus altitudinis strain NJ-V2]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAAGACGAACCGTTTTTAAAAGGGACGGTTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAAGTAAAAGTCATTGAAACATCAGAGAATTTAGAGGAAAAGACAGCATCTGTCA
CAGGGTACTTCCCAGCGCTTCATGAGGAGGAAACCTACACCTTCTATGGCAAGGTCACAAGTCATCCGAAGTTTGGCGAG
CAGTTTCAAGCCACTCATTTTCAAAAGGAAGTCCCTACAACAAAGCAAGGCATCATTCATTATCTCTCTAGTGACTTGTT
TGAAGGGATTGGAAAAAAGACGGCGGAAGAAATCGTCGGCAAGCTTGGCAATCAGACGCTTCATCAAATTATGCGTGATC
CGTCTGTGTTGTATGATGTCCCTCGCCTGTCAAAAAAGAAGGCCGATAAGCTGGCTGCCGCACTTCAAGAGCATCAAGGG
CTTGAGCAAATCATGATCAGCCTGAATCAATATGGTTTTGGTCCTCAGCTTAGCATGAAGATTTACCAAGTATACGAGAG
TGAAACGTTGCAGAAAATTGAAGAAAATCCTTATCAGCTCGTCAAAGACGTCGAGGGGATTGGCTTTATTAAAGCAGATG
AACTCGGCGCTAGAACAGGGATATCTGGAAATGATCCAGACCGCATTCGTGCAGCCCTTTTGTATACCGTTGAGACAGCA
AGCCTGCAGGACGGTCATACGTACATACAAACGAAAGATCTGATCGTCGAAACCCGTAAACTGCTGAATCAAACCGGCAA
TGACTACAAAGTGACTGAAATGGACGTTGCCAATCAGATCATTGCACTTGGTGAAGGGAAAGACATGATTATTGAAGATG
AGCGCTGTTATCATCCGTCGCTCTTTTATGCGGAGCAAAGTGTGGCAAAACGCATTCAAAAAATTGTCGCTCAAACGGAA
TATGCAGATCAATTTCCTGAATCAGAATTTCTGCTTGCACTCGGTGAACTGGAGGAACGGCTTGGTGTCCAGTATGCACC
AACCCAAAAAGAAGCCATTCAAAAGGCACTCATGTCTCCAATGCTGCTTTTAACAGGCGGACCGGGTACAGGGAAAACGA
CGGTCATTAAAGGAATTGTCGAGCTTTATAGCGATCTTCACGGCGTATCTCTTGACCCGGGTGATTATAAAAAAGATGAA
GCATTTCCGTTCGTGCTTGCCGCACCAACTGGACGTGCTGCGAAACGAATGACAGAATCCACTGGACTTCCTGCTGTGAC
CATTCACCGGCTGCTAGGCTGGAATGGATCAGAAGGCTTCTCACATGATGAAGACCAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCGAGTATGCTGGATATTTGGCTGGCGAACCATTTGTTTAAGGCGATCCCAGATCATATTCAAGTCATT
ATGGTTGGAGACGAACATCAACTTCCATCTGTCGGGCCTGGTCAAGTGTTAAGAGACCTGCTTGCGTCACAAGCTATACC
GGCAGTTACATTAACTGATATTTACCGGCAGGCAGACGGTTCAACAATTGTTGAGCTTGCACATGATATGAAAAATGGTG
TTTTGCCAAAGGATATTACTGCACGCTCGAAGGATCGATCCTTTATTCAATGCTCTAGTGACCAAATGAAAGAAGTCATC
GAGAAAGTGGTCAGCAATGCTGCTCAAAAGGGTTATTCAGCAAAGGACATTCAAGTACTTGCCCCGATGTATAAAGGAAA
AGCAGGCATTAATGAACTGAATAAAATGCTCCAGCAAATTTTGAATCCTAAAAAGCCAAAAGGAAGAGAAATTCCATTTG
GTGATGTCGTCTACCGGACAGGTGATAAGGTACTTCAGCTTGTCAATCAGCCCGAGAATAACATTTTTAATGGAGATATT
GGAGAAATTGTCTCGATCTTTTATGCGAAAGAAAACACGGAAAAAGAAGATATGGCAGTCATCTCCTTTGATGGAAACGA
AATCACGTTTACGAAAAAAGATTTTCATCAATTTACACACGCTTATTGTTGCTCGATTCATAAATCCCAGGGCAGTGAAT
TCCCAATCGTGGTGCTGCCAGTCGTGAGAAGTTATTATCGAATGCTTCGAAGAAATTTGCTTTACACGGCCATTACACGA
AGTAAAAAGTTTTTAATTTTGTGCGGTGAGGAATCAGCATTAGAGTGGGGCGTAAAAAATAATGAAGACTCCCTCAGACA
AACGTCTTTAACTATGCGTCTTACTGAAACGGAAGAAGTCATGGATGCTGAGCTAGCAGCCCTCCAAAAAGAACTTCCTT
TCAGCGTACACGATGCCAATATTGGCATGGAGGGAATCACCCCGTTTGATTTTATGCAAGAGTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	80	100	0.801