Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   AMM49_RS00005 Genome accession   NZ_CP012480
Coordinates   2073409..27 (+) Length   266 a.a.
NCBI ID   WP_060914845.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain NGBS128     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2068409..5027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - spo0J 2073409..27 (+) -2073381 - - Regulator

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30252.87 Da        Isoelectric Point: 9.7679

>NTDB_id=154571 AMM49_RS00005 WP_060914845.1 2073409..27(+) (spo0J) [Streptococcus agalactiae strain NGBS128]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFNNQEELNRIINTLKKGVDYFFI

Nucleotide


Download         Length: 0 bp        

>NTDB_id=154571 AMM49_RS00005 WP_060914845.1 2073409..27(+) (spo0J) [Streptococcus agalactiae strain NGBS128]

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

96.226

0.555

Multiple sequence alignment