Detailed information NTG0154142

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: A6M16_RS02140
• Genome accession: NZ_CP015557
• Coordinates: 407525..409915 (+)
• Length: 796 a.a.
• NCBI ID: WP_063725170.1
• Uniprot ID: -
• Organism: Streptococcus suis strain DN13
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 402525..414915

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6M16_RS02120 (A6M16_02120)	-	403845..404327 (-)	483	WP_004194159.1	S-ribosylhomocysteine lyase	-
A6M16_RS02125 (A6M16_02125)	-	404456..406069 (+)	1614	WP_011921986.1	ribonuclease Y	-
A6M16_RS02130 (A6M16_02130)	gmk	406217..406843 (+)	627	WP_063725169.1	guanylate kinase	-
A6M16_RS02135 (A6M16_02135)	rpoZ	406867..407181 (+)	315	WP_004194153.1	DNA-directed RNA polymerase subunit omega	-
A6M16_RS02140 (A6M16_02140)	priA	407525..409915 (+)	2391	WP_063725170.1	primosomal protein N'	Machinery gene
A6M16_RS02145 (A6M16_02145)	fmt	410047..410985 (+)	939	WP_024395775.1	methionyl-tRNA formyltransferase	-
A6M16_RS02150 (A6M16_02150)	rsmB	410972..412285 (+)	1314	WP_079270695.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
A6M16_RS02155 (A6M16_02155)	-	412323..413060 (+)	738	WP_004194145.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
A6M16_RS02160 (A6M16_02160)	pknB	413060..414589 (+)	1530	Protein_378	Stk1 family PASTA domain-containing Ser/Thr kinase	-

Sequence

Protein

• Length: 796 a.a.
• Molecular weight: 90980.81 Da
• Isoelectric Point: 6.0848

>NTDB_id=154142 A6M16_RS02140 WP_063725170.1 407525..409915(+) (priA) [Streptococcus suis strain DN13]
MLAQIIVDVPLMQTDQAYSYRVPAELEEGLKVGVRVHVPFGKGNRLIQGIVVDLIDEDDENSLQDLKELAEVLDYSPVLN
QEQFWLADQMRKSVFSYKITLLKSMLPSLLNSTYDKLLRPGLGLEMAEQISLFGDKEQIRFSDLDVTEQGKIMRLAQSGK
ILVDYVAKDKKQIKTEKWYRVCLEKLREADISNRAKKRQQLREFLLEHSEDQLLSNLKSDYSADTLRYFQEKGYIEVWEE
EVSRTQGVFDKVEKTQALDLNPEQAIAVREIVASIGQESQTFLLQGVTGSGKTEVYLQVIDRVLKMGKTAIMLVPEISLT
PQMTNRFISRFGQQVAILHSGLSDGEKYDEWRKIEAGNAQVVVGARSAIFAPLTNLGVIIIDEEHEATYKQDSNPRYHAR
DVAKLRADYNRATLVLGSATPSLETRARASRGVYGRLTLNQRANPLARIPEVEVVDFRDYIGQQEASNFTPVLIDKIREK
LARKEQVVLMLNRRGYSSFVMCRDCGSVDQCPNCDISLTLHMDTKTMNCHYCGFQKGIPQTCPNCQSRSIRYYGTGTQKA
YDELQELLPEARILRMDVDTTKKKGAHEDLLERFGRGEADILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERT
FQLLTQVAGRAGRADKEGEVLIQTYNPNHYAIAFAKEQDYEGFYRYEMGIRKNLGYPPYYFTVGLTFSHKSEEFVVKKAY
ETVAFLRQHLTDAIQILGPTPKPIARTHNLYHYQIILKYRHEDRLEEVLNQILDWTQERENQDLRLIIDNEPQNMM

Nucleotide

• Length: 2391 bp

>NTDB_id=154142 A6M16_RS02140 WP_063725170.1 407525..409915(+) (priA) [Streptococcus suis strain DN13]
ATGTTAGCACAGATTATTGTAGACGTCCCTTTGATGCAGACAGATCAAGCTTATTCTTATCGAGTTCCAGCTGAGTTGGA
AGAGGGACTCAAGGTTGGCGTGCGTGTCCATGTACCCTTTGGTAAGGGAAATCGGCTGATTCAAGGGATTGTAGTTGATT
TGATTGATGAAGATGATGAAAATAGCTTACAAGACTTGAAAGAGCTTGCCGAGGTTTTGGATTATAGTCCTGTTCTCAAT
CAAGAGCAATTTTGGTTGGCGGACCAGATGAGAAAGTCGGTCTTCTCCTATAAAATTACCCTCTTAAAATCCATGTTGCC
CAGCTTACTCAATTCGACCTATGACAAATTGCTCCGTCCAGGGCTTGGTTTGGAAATGGCAGAGCAGATTAGTCTGTTTG
GTGATAAGGAGCAGATTCGTTTTTCTGACTTGGACGTGACAGAGCAAGGGAAAATCATGCGTCTGGCCCAGTCAGGAAAA
ATCTTGGTAGACTATGTGGCCAAGGATAAGAAGCAAATCAAGACAGAAAAATGGTACCGAGTTTGTCTGGAGAAATTACG
AGAAGCAGACATTAGCAATCGGGCTAAAAAACGGCAGCAGTTAAGGGAATTTCTTCTGGAACACTCGGAAGACCAGCTTC
TTTCAAACCTAAAATCGGACTATTCAGCTGATACGCTCCGCTATTTCCAAGAAAAAGGCTATATAGAAGTCTGGGAAGAG
GAAGTGTCGCGGACTCAGGGAGTTTTTGATAAGGTGGAAAAAACGCAGGCCTTGGATTTGAATCCAGAGCAGGCCATTGC
GGTTCGGGAGATTGTGGCCTCTATCGGTCAGGAAAGTCAGACATTTCTACTGCAAGGAGTGACAGGCTCTGGGAAGACGG
AAGTCTATCTCCAGGTTATTGATAGGGTCTTGAAAATGGGGAAAACGGCTATTATGCTGGTGCCTGAAATTTCCTTGACC
CCTCAGATGACCAATCGTTTTATTTCTCGTTTTGGCCAGCAGGTTGCCATTTTGCACTCGGGCTTGTCTGATGGTGAGAA
GTACGATGAGTGGCGGAAGATTGAGGCGGGAAATGCCCAGGTGGTTGTCGGGGCCCGTTCGGCCATTTTTGCCCCTTTGA
CAAACTTGGGTGTTATCATCATTGATGAGGAGCATGAGGCGACCTACAAGCAGGACAGCAATCCACGCTACCATGCGCGT
GATGTGGCAAAGTTGCGGGCGGATTATAATCGAGCGACCCTGGTCTTGGGTTCTGCTACGCCGAGTCTTGAAACACGGGC
TCGGGCTAGTCGCGGAGTCTATGGAAGACTGACTCTTAACCAGAGGGCCAATCCCTTGGCTCGTATTCCAGAAGTGGAAG
TTGTGGATTTCCGTGATTATATCGGTCAGCAGGAGGCTAGTAATTTTACCCCTGTTCTGATTGATAAGATAAGAGAAAAA
TTGGCTCGTAAGGAACAGGTCGTTCTTATGTTGAATCGGCGTGGTTATTCTTCTTTTGTCATGTGTCGTGATTGTGGTAG
CGTTGACCAGTGTCCCAACTGTGATATTTCCCTAACGCTTCACATGGATACAAAAACGATGAATTGCCATTATTGTGGTT
TTCAAAAGGGGATTCCTCAGACCTGTCCAAACTGTCAAAGTCGTTCTATTCGTTATTATGGGACGGGTACGCAAAAGGCC
TACGATGAATTGCAGGAGCTCTTGCCAGAAGCTAGAATTTTGCGTATGGATGTGGATACTACCAAGAAAAAAGGTGCTCA
TGAGGACTTGCTCGAACGGTTTGGTCGAGGCGAGGCGGATATTCTTCTGGGAACTCAGATGATTGCCAAGGGCTTGGATT
TTCCAAATGTGACCCTAGTTGGGGTGCTCAATGCGGATACGGCTCTGAATTTGCCTGATTTTCGGTCTTCTGAGCGGACC
TTCCAGTTGCTAACTCAGGTAGCTGGTCGGGCAGGTCGAGCTGATAAGGAAGGGGAGGTCCTGATTCAGACCTATAACCC
CAATCATTATGCCATTGCTTTTGCCAAAGAGCAGGATTATGAAGGTTTCTATCGTTATGAGATGGGCATTCGGAAAAATC
TTGGTTATCCACCTTACTATTTTACGGTTGGTCTAACCTTTTCGCACAAGTCAGAAGAATTTGTCGTGAAAAAAGCCTAT
GAAACTGTAGCCTTTCTCCGTCAACACTTAACAGATGCAATTCAAATCTTGGGACCGACGCCCAAGCCTATTGCCAGAAC
TCATAATCTCTACCACTACCAGATCATCTTGAAATACCGGCATGAAGACCGTTTGGAAGAGGTATTGAATCAGATTTTGG
ATTGGACACAGGAGAGAGAAAATCAAGATTTGCGGCTGATTATTGACAATGAACCGCAGAATATGATGTGA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (570-654)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (4-107)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (511-536)

• Type III restriction enzyme, res subunit (ResIII) (259-422)

• Primosomal protein N C-terminal domain (PriA_C) (698-792)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	47.831	100	0.485