Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   V471_RS05715 Genome accession   NZ_CP015283
Coordinates   1119253..1121121 (+) Length   622 a.a.
NCBI ID   WP_049554223.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 25975     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1114253..1126121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V471_RS05705 (V471_05625) gshAB 1114708..1116972 (-) 2265 WP_084871200.1 bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB -
  V471_RS05710 (V471_05630) - 1117518..1119263 (+) 1746 WP_002886878.1 ABC transporter ATP-binding protein -
  V471_RS05715 (V471_05635) rcrQ 1119253..1121121 (+) 1869 WP_049554223.1 ABC transporter ATP-binding protein Regulator
  V471_RS05720 (V471_05640) - 1121216..1122739 (-) 1524 WP_084871201.1 ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 622 a.a.        Molecular weight: 68749.08 Da        Isoelectric Point: 4.9866

>NTDB_id=153176 V471_RS05715 WP_049554223.1 1119253..1121121(+) (rcrQ) [Streptococcus salivarius strain ATCC 25975]
MQNKKKANWGSLARLLRFLWQDYKLSLSIAFVLIVVASLATVNLTASIQSLVDVYVQPMLKSGSHDFGPLLHFLTSVGVF
CLIGVIANYVSSLLMATISQDSLRSLRNQLFARMQKLPVRYFDTHQHGDIMSIYTNDIDALRQAVEQSIPQLLQTAITLI
GVTVTMLTVSPLLFIVVLVMVGIMFMVIKNVSAKSGRYFGEQQKNLGIENGFIEEMMSGQKVVKAFVHEEESMADFDKIN
EQLFESSYLANRYANVLMPILGNLGNVSFVLTALVGGLFALNGVGGLTIGGLMAFLQLNRSFNGPITQVSQQLNFVLMAL
AGADRIFDLLDEPEEVDQGKVTLVNYELVDGQMVVTDKKTNLWAWKHPRPNGDYELVELVGNVVFQDVDFSYDGKKQILH
DVNLYADKGQKVAFVGATGAGKTTITNLINRFYDIQSGVITYDGIDVKLIEKDSLRRSLGIVLQDTHLFTGTIAENIAYG
RSDATREEILEAARIANVDSFVQHLDNGYDTVLTDDGAGLSNGQRQLIAIARAALANAPVLILDEATSSIDSRTEKMVQE
GMDRLMEGRTVFVIAHRLSTIVNSDVIMVMDHGRIIERGDHDSLMEQGGTYYRLYTGGLEID

Nucleotide


Download         Length: 1869 bp        

>NTDB_id=153176 V471_RS05715 WP_049554223.1 1119253..1121121(+) (rcrQ) [Streptococcus salivarius strain ATCC 25975]
ATGCAGAATAAGAAAAAAGCTAATTGGGGCTCTCTAGCACGTCTTCTACGCTTTTTGTGGCAAGACTACAAACTTTCACT
TTCTATCGCCTTTGTCCTTATTGTGGTTGCTTCCTTGGCAACGGTCAATTTGACGGCCTCTATTCAGTCCTTGGTTGACG
TATACGTTCAACCCATGCTCAAATCTGGTAGCCATGACTTTGGTCCGCTTTTGCATTTCTTGACTTCAGTGGGGGTCTTC
TGTCTTATTGGTGTGATTGCCAACTATGTGTCATCACTCCTCATGGCGACGATTTCGCAAGATTCTCTACGTTCCCTTCG
TAATCAGCTCTTTGCTCGTATGCAAAAGCTTCCTGTTCGCTACTTTGACACTCACCAACACGGTGACATCATGTCTATTT
ACACCAACGACATCGATGCCCTCCGTCAGGCTGTTGAGCAGTCTATTCCACAGTTGCTACAAACGGCCATTACCTTGATT
GGGGTAACTGTAACCATGCTTACGGTTAGTCCTCTTCTCTTTATCGTGGTCCTAGTCATGGTAGGTATCATGTTTATGGT
CATCAAAAATGTATCAGCTAAATCAGGCCGTTACTTTGGTGAACAACAAAAGAATCTTGGGATTGAAAATGGCTTCATTG
AAGAAATGATGTCAGGTCAAAAAGTGGTCAAGGCCTTTGTTCACGAAGAAGAAAGCATGGCTGATTTTGACAAGATTAAC
GAGCAACTCTTTGAATCTTCTTACTTGGCCAACCGCTATGCCAATGTTCTCATGCCAATTCTTGGGAACTTAGGAAATGT
TTCCTTTGTTTTGACCGCCTTGGTTGGTGGACTCTTTGCCCTTAATGGTGTTGGTGGTTTGACTATCGGTGGTCTCATGG
CCTTCCTACAATTGAACCGTTCCTTCAACGGTCCTATTACTCAGGTCTCTCAACAACTGAACTTTGTTCTTATGGCACTT
GCAGGTGCTGACCGTATCTTTGACCTCTTGGATGAGCCAGAAGAAGTTGACCAAGGTAAGGTCACTTTGGTCAACTACGA
ATTGGTAGATGGTCAAATGGTTGTGACAGACAAGAAAACCAATCTCTGGGCTTGGAAACACCCACGTCCAAATGGCGACT
ACGAATTGGTCGAGTTGGTCGGAAATGTGGTCTTCCAAGACGTTGATTTCTCTTACGATGGTAAGAAACAAATCCTTCAT
GACGTTAATCTCTATGCAGACAAGGGGCAAAAGGTTGCCTTTGTCGGTGCGACAGGTGCTGGTAAGACGACGATTACCAA
CTTGATTAACCGTTTCTACGATATCCAATCTGGTGTGATTACTTATGATGGTATTGATGTCAAGCTGATTGAGAAAGATT
CTCTTCGTCGCTCGCTTGGTATCGTGCTTCAAGATACCCATCTCTTCACAGGGACTATCGCTGAAAATATTGCCTATGGC
CGTTCCGATGCGACACGCGAGGAAATTCTTGAAGCTGCCCGTATTGCTAACGTGGATTCCTTTGTGCAACACCTGGATAA
TGGGTATGACACTGTTCTGACAGATGACGGTGCAGGCTTGTCTAACGGGCAACGTCAGCTTATCGCCATTGCGCGTGCTG
CCCTTGCCAATGCACCGGTTCTTATCCTTGACGAGGCGACATCCTCTATTGACTCTCGTACCGAAAAAATGGTGCAAGAG
GGGATGGACCGTCTTATGGAAGGACGTACGGTTTTCGTTATTGCCCACCGTCTTTCAACCATCGTCAACTCTGACGTTAT
CATGGTTATGGACCACGGACGAATCATTGAACGTGGTGACCACGACAGCCTTATGGAACAAGGTGGTACCTACTACCGAC
TCTATACTGGTGGTCTTGAAATTGATTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(399-548)

ABC transporter transmembrane region (ABC_membrane)

(29-305)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

36.911

98.875

0.365