Detailed information    

insolico Bioinformatically predicted

Overview


Name   priA   Type   Machinery gene
Locus tag   NX99_RS09710 Genome accession   NZ_CP015282
Coordinates   2071270..2073666 (+) Length   798 a.a.
NCBI ID   WP_084915454.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 27945     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2066270..2078666
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX99_RS09680 (NX99_09525) - 2066378..2066755 (-) 378 WP_002884206.1 GntR family transcriptional regulator -
  NX99_RS09685 (NX99_09530) - 2066937..2067731 (+) 795 WP_084915448.1 HAD-IIB family hydrolase -
  NX99_RS09690 (NX99_09535) - 2067724..2068542 (+) 819 WP_084915450.1 Cof-type HAD-IIB family hydrolase -
  NX99_RS09695 (NX99_09540) ftsY 2068553..2069926 (+) 1374 WP_084915452.1 signal recognition particle-docking protein FtsY -
  NX99_RS09700 (NX99_09545) gmk 2070162..2070791 (+) 630 WP_002884259.1 guanylate kinase -
  NX99_RS09705 (NX99_09550) rpoZ 2070813..2071127 (+) 315 WP_002886855.1 DNA-directed RNA polymerase subunit omega -
  NX99_RS09710 (NX99_09555) priA 2071270..2073666 (+) 2397 WP_084915454.1 primosomal protein N' Machinery gene
  NX99_RS09715 (NX99_09560) fmt 2073684..2074619 (+) 936 WP_084915456.1 methionyl-tRNA formyltransferase -
  NX99_RS09720 (NX99_09565) rsmB 2074609..2075931 (+) 1323 WP_084915504.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  NX99_RS09725 (NX99_09570) - 2075975..2076712 (+) 738 WP_037598574.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  NX99_RS09730 (NX99_09575) stkP/pknB 2076712..2078586 (+) 1875 WP_084915458.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator

Sequence


Protein


Download         Length: 798 a.a.        Molecular weight: 91044.32 Da        Isoelectric Point: 6.5513

>NTDB_id=153091 NX99_RS09710 WP_084915454.1 2071270..2073666(+) (priA) [Streptococcus salivarius strain ATCC 27945]
MVLVAQIIVDVPLMQTDRPYSYLIPEAMQDQIALGMRVHVPFGKGNRLLQGFVIGLEEQEDLRDFPELKPIAELLDYEPV
LNQDQLDLADQMRHTVFSYKISILKSMLPGLLNSQYDKVIMATDRLDEEDKQTFLQGQDHVLFSQLSEEQRQAIPRLVQS
GRVTVDYLAKDKQNIKTEKHYSVQKGILETLAISQRAKRRLEMRDFLLKKSEPGKVADLHKLFSRDVVKFFIEAGALVIT
EVEVNRADSYFEKVEKTDFLELNVQQAQAVEEMMRQIGQGGKPFLLEGVTGSGKTEVYLHLIERTLAMGKTAIVLVPEIS
LTPQMTNRFISRFGDLVAIMHSGLSDGEKFDEWRKVRSGQAKVVVGARSAIFAPLDNIGAIIIDEEHEATYKQESNPRYH
ARDVALLRAKSHGAVLVLGSATPSIETRARAQKGVYHFLELTQRANPNAKIPQVEVVDFKDFVGRQEASDFTPPLLEKIR
ERLGRKEQVVLMLNRRGYSSFVMCRDCGYVDDCPNCDISLTLHMDTKTMNCHYCDFQKAIPHVCPNCQSRQIRYYGTGTQ
KAYDQLTELLPEAKVIRMDVDTTRKKGAHEKLLEAFGSGKADILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSAE
RTFQLLTQVAGRAGRADKEGEVIIQTYNPSHYAIRFAQQQDYEGFYAYEMGIRRQLAYPPYFYTVGITLSHKDEEFVVRK
SYEVMAYLREHLSDKVTFLGPTPKPIARTHNLYHYQIIIKYRFEDNLEETLNRVLDMTQEPENKDLRLIIDHEPQNFT

Nucleotide


Download         Length: 2397 bp        

>NTDB_id=153091 NX99_RS09710 WP_084915454.1 2071270..2073666(+) (priA) [Streptococcus salivarius strain ATCC 27945]
ATGGTTTTAGTAGCACAAATTATTGTAGACGTTCCTCTGATGCAGACGGACAGACCTTATAGTTACCTTATCCCTGAAGC
TATGCAAGATCAAATTGCCCTTGGTATGCGAGTGCATGTACCTTTCGGTAAAGGAAATCGTCTATTGCAAGGCTTTGTTA
TTGGCTTAGAGGAGCAGGAGGATTTAAGAGACTTTCCTGAATTAAAACCTATTGCTGAGCTTTTAGATTATGAGCCAGTC
CTTAATCAGGATCAACTGGACTTGGCTGATCAGATGCGACATACGGTCTTTTCCTATAAGATTTCCATCTTGAAGTCAAT
GCTACCTGGTCTCCTTAATTCCCAGTACGATAAGGTTATCATGGCGACTGATAGACTGGATGAAGAGGATAAACAGACTT
TTCTTCAGGGGCAGGATCATGTTCTTTTCTCGCAGTTGTCAGAGGAGCAGCGTCAAGCCATTCCTCGTCTGGTCCAGTCT
GGGCGTGTAACGGTTGATTACCTTGCTAAGGATAAGCAGAACATTAAGACTGAGAAGCACTATAGTGTTCAAAAGGGCAT
TCTTGAGACTTTGGCTATTTCGCAACGGGCTAAGAGGCGTTTGGAGATGCGAGACTTCTTGCTCAAGAAGAGCGAGCCAG
GGAAGGTGGCAGACCTCCACAAGCTTTTTTCACGAGATGTGGTTAAGTTTTTCATCGAAGCTGGTGCCTTGGTCATCACT
GAAGTTGAGGTCAATCGTGCCGACAGCTACTTTGAAAAGGTAGAAAAGACAGATTTTCTTGAGCTTAATGTTCAACAGGC
ACAGGCTGTTGAAGAAATGATGCGCCAAATCGGACAAGGTGGCAAACCTTTCTTATTGGAAGGAGTGACGGGATCAGGTA
AGACCGAAGTTTATCTGCATCTTATCGAGAGGACCTTGGCTATGGGGAAAACGGCTATTGTCTTGGTGCCAGAGATTTCC
CTGACGCCCCAAATGACCAATCGTTTCATTTCACGTTTTGGTGACTTGGTGGCGATTATGCATTCAGGCTTGTCAGACGG
TGAGAAATTTGACGAGTGGCGAAAGGTTAGATCTGGCCAGGCCAAGGTAGTGGTAGGAGCACGTTCGGCTATCTTTGCTC
CCTTGGACAATATCGGAGCGATCATTATCGATGAGGAACATGAGGCTACTTATAAACAAGAATCCAATCCTCGCTATCAT
GCTAGAGATGTGGCCTTGCTTAGGGCTAAGAGTCATGGAGCCGTGCTTGTTCTTGGTTCAGCAACACCGTCTATTGAGAC
TCGGGCGAGAGCTCAGAAAGGGGTTTACCATTTTCTTGAGTTGACTCAGAGGGCTAATCCTAATGCCAAAATTCCTCAGG
TGGAAGTGGTGGACTTTAAGGATTTTGTGGGCCGTCAAGAGGCTAGTGATTTTACGCCACCTCTCTTAGAGAAAATCCGA
GAACGCTTGGGACGTAAGGAACAAGTCGTGCTAATGTTGAACCGTCGTGGCTATTCCTCTTTTGTCATGTGTCGTGACTG
TGGCTATGTGGATGATTGTCCCAACTGTGATATTTCCCTAACCTTGCATATGGATACCAAGACCATGAATTGCCACTATT
GTGATTTTCAAAAAGCAATACCACATGTCTGCCCTAACTGTCAGAGCCGTCAGATTCGCTATTATGGGACTGGGACACAG
AAGGCTTATGACCAATTGACGGAACTTTTGCCAGAAGCCAAAGTGATTCGTATGGATGTTGATACGACACGCAAGAAAGG
GGCTCACGAGAAACTCTTGGAGGCCTTTGGAAGTGGTAAGGCTGACATTTTGCTTGGAACTCAGATGATTGCCAAGGGCT
TGGATTTTCCAAATGTTACCTTGGTAGGGGTCTTGAATGCAGATACGTCGCTAAATTTACCAGATTTTCGTTCAGCTGAG
CGTACCTTCCAACTGTTGACTCAGGTGGCTGGTCGTGCTGGTCGTGCTGACAAGGAAGGGGAAGTTATTATTCAAACCTA
TAATCCTAGTCATTATGCCATTCGGTTTGCACAGCAACAGGATTATGAAGGTTTCTACGCCTATGAAATGGGGATTCGAC
GTCAGTTGGCCTATCCCCCTTATTTCTATACGGTAGGGATTACGCTTTCTCACAAGGATGAAGAGTTTGTAGTTCGCAAG
AGCTATGAGGTAATGGCTTATTTAAGAGAGCACCTGTCAGACAAGGTGACCTTCCTAGGGCCTACGCCTAAGCCGATTGC
TCGAACACATAACCTTTATCACTATCAGATTATTATCAAATACCGTTTTGAGGATAACTTGGAAGAAACGCTTAATAGGG
TCCTTGACATGACCCAGGAACCTGAAAACAAGGATCTGCGTTTGATTATTGATCACGAACCTCAGAATTTTACCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Bacillus subtilis subsp. subtilis str. 168

48.383

100

0.487