Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   NX99_RS08635 Genome accession   NZ_CP015282
Coordinates   1856739..1857482 (+) Length   247 a.a.
NCBI ID   WP_037602492.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 27945     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1851739..1862482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX99_RS08615 (NX99_08470) dinB 1852251..1853360 (+) 1110 WP_084915342.1 DNA polymerase IV -
  NX99_RS08620 (NX99_08475) - 1853461..1854351 (+) 891 WP_084915343.1 peptidase -
  NX99_RS08625 (NX99_08480) - 1854566..1855396 (+) 831 WP_048674808.1 transporter substrate-binding domain-containing protein -
  NX99_RS08630 (NX99_08485) - 1855993..1856739 (+) 747 WP_096832659.1 amino acid ABC transporter permease -
  NX99_RS08635 (NX99_08490) amiE 1856739..1857482 (+) 744 WP_037602492.1 amino acid ABC transporter ATP-binding protein Regulator
  NX99_RS08640 (NX99_08495) - 1857695..1857919 (+) 225 WP_002888207.1 DUF4059 family protein -
  NX99_RS08645 (NX99_08500) trxB 1857952..1858905 (+) 954 WP_257788656.1 thioredoxin-disulfide reductase -
  NX99_RS08650 (NX99_08505) rsmD 1859046..1859594 (+) 549 WP_231910681.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  NX99_RS08655 (NX99_08510) coaD 1859627..1860124 (+) 498 WP_022495906.1 pantetheine-phosphate adenylyltransferase -
  NX99_RS08660 (NX99_08515) sepM 1860102..1861178 (+) 1077 WP_004183329.1 SepM family pheromone-processing serine protease Regulator
  NX99_RS08665 (NX99_08520) - 1861264..1862211 (+) 948 WP_084915347.1 TIGR01212 family radical SAM protein -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27696.82 Da        Isoelectric Point: 5.7892

>NTDB_id=153074 NX99_RS08635 WP_037602492.1 1856739..1857482(+) (amiE) [Streptococcus salivarius strain ATCC 27945]
MISIKNLTKEFSGQKVLDGIDIDIEKGEVVALVGASGAGKSTILRSLNYLEQPDSGTIIIDDFKVDFETITKEQILTLRR
KLAMVFQQFNLFERRTALDNVKEGLKIVKKLSDEEATKIAKEELAKVGLSNRENHYPRHLSGGQKQRVALARALAMKPDV
LLLDEPTSALDPELVGEVEKSIADAAKSGQTMILVSHDMNFVYQVADKVLFLEKGRILEQGTPDEIFNHPKEERTKEFFA
SYSKQYL

Nucleotide


Download         Length: 744 bp        

>NTDB_id=153074 NX99_RS08635 WP_037602492.1 1856739..1857482(+) (amiE) [Streptococcus salivarius strain ATCC 27945]
ATGATTAGTATCAAAAATTTGACCAAGGAATTTTCAGGTCAAAAGGTTCTCGATGGTATTGATATCGACATTGAAAAGGG
TGAAGTTGTAGCTCTTGTTGGTGCCTCTGGTGCAGGGAAATCAACAATTCTTCGCAGCTTAAACTATTTGGAACAACCTG
ATTCTGGTACCATTATCATTGATGATTTCAAGGTAGATTTTGAAACAATTACCAAAGAACAAATCCTTACTCTTCGTCGT
AAGTTGGCCATGGTGTTCCAACAGTTCAACCTCTTTGAACGCCGTACTGCCTTGGATAATGTTAAGGAAGGTCTTAAAAT
CGTTAAGAAACTTTCTGATGAAGAAGCGACTAAGATTGCCAAAGAAGAGCTTGCTAAGGTTGGACTTTCAAATCGCGAAA
ATCACTACCCACGTCACTTGTCAGGTGGTCAAAAGCAACGTGTGGCCTTGGCCCGTGCCCTTGCTATGAAGCCTGACGTG
CTCTTGCTTGACGAACCAACATCTGCCCTTGACCCTGAGTTGGTTGGTGAGGTTGAAAAATCAATCGCTGATGCGGCTAA
GTCAGGTCAAACTATGATTTTGGTCAGTCACGACATGAACTTTGTTTATCAAGTGGCTGACAAGGTACTCTTCCTTGAGA
AAGGTCGTATTCTTGAACAGGGAACACCTGATGAAATCTTTAACCATCCGAAAGAAGAACGAACAAAAGAATTTTTCGCT
TCTTATTCAAAACAATATCTTTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-168)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

33.708

100

0.364