Detailed information NTG0153065

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: NX99_RS08135
• Genome accession: NZ_CP015282
• Coordinates: 1744131..1746635 (-)
• Length: 834 a.a.
• NCBI ID: WP_084915280.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ATCC 27945
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1739131..1751635

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NX99_RS08105 (NX99_07965)	-	1740417..1740647 (-)	231	WP_022495963.1	DNA-dependent RNA polymerase subunit epsilon	-
NX99_RS08110 (NX99_07970)	tsaB	1740908..1741594 (+)	687	WP_014635061.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
NX99_RS08115 (NX99_07975)	rimI	1741554..1742009 (+)	456	WP_037602742.1	ribosomal protein S18-alanine N-acetyltransferase	-
NX99_RS08120 (NX99_07980)	tsaD	1742009..1743022 (+)	1014	WP_014635059.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
NX99_RS08125 (NX99_07985)	-	1743074..1743766 (+)	693	WP_002884750.1	AzlC family ABC transporter permease	-
NX99_RS08130 (NX99_07990)	-	1743753..1744079 (+)	327	WP_022495964.1	AzlD domain-containing protein	-
NX99_RS08135 (NX99_07995)	recD/recD2/recDB	1744131..1746635 (-)	2505	WP_084915280.1	ATP-dependent RecD-like DNA helicase	Machinery gene
NX99_RS08140 (NX99_08000)	lepB	1746696..1747337 (-)	642	WP_002884233.1	signal peptidase I	-
NX99_RS08145 (NX99_08005)	rnhC	1747356..1748246 (-)	891	WP_084915282.1	ribonuclease HIII	-
NX99_RS08150 (NX99_08010)	zapA	1748562..1748876 (+)	315	WP_004183554.1	cell division protein ZapA	-
NX99_RS08155 (NX99_08015)	-	1748873..1749415 (+)	543	WP_084915283.1	CvpA family protein	-

Sequence

Protein

• Length: 834 a.a.
• Molecular weight: 94121.49 Da
• Isoelectric Point: 4.4546

>NTDB_id=153065 NX99_RS08135 WP_084915280.1 1744131..1746635(-) (recD/recD2/recDB) [Streptococcus salivarius strain ATCC 27945]
MQEFYFSGTIERVIFENASNFFRILLLEIDETDSDFEDYEIIVTGTMGDVMEGEDYTFWGQLTNHPKYGEQLQMTRYERS
KPSASGLIKYFASDNFKGIGKKTAERIVEIYGEDPIDQILEDPSKLEQIPNLSKVNREAFVAKLKINYGTEQILSKLSNY
GLTPKAASQIFNQYKEESLNLIEEHPYLLVEEVQGIGFKIADQLAERLGIASDAPERLRAALIHCLLEASMEEGDTYIEA
KALLERTIILLESARQIELDPALVAKELTNLIQEDKVQNIETKIFDNTLYFAEQGIYTHLTRIIKDQPDISAEDKIQASL
EEVEEELGITYDKVQKDAIIKALQSKVFILTGGPGTGKTTVINGIIKTYADLHGLDLKKSDLPIILAAPTGRAARRMNEL
TQLPSATIHRHLGLNSEDDFKTLEDYLDCDLIIIDEFSMVDTWLANQLFESISDSTQVIIVGDQDQLPSVGPGQVLADLL
QIDDLPKVSLTKIFRQSEDSTIVTLASQMRQGQLPADFTEKKADRSYFEANANHIPQMVPKIVSAAIKSGIAAQDVQILA
PMYRGQAGINNLNTIMQDLLNPQEKANQFAFNDIFFRKNDKILHLVNDTELNVFNGDIGIITDLIPGKYTESKQDEIYMS
FDGNEVIYPRNEWNKITLAYAMSIHKSQGSEFPVVILPITRQSGRMLQRNLIYTAITRAKSKLVMLGEIAAFDYAVRNEG
AKRNTFLIQRFEQTYTQAVDKSVEKIVKNLATEAPNQTKTKNNYPSETFENKDFSENINPSQNLVNTYSQPVDKSVNKPV
QTEENYRLTEENWATIDPMIGLSEDDIAAFFNNN

Nucleotide

• Length: 2505 bp

>NTDB_id=153065 NX99_RS08135 WP_084915280.1 1744131..1746635(-) (recD/recD2/recDB) [Streptococcus salivarius strain ATCC 27945]
ATGCAAGAATTTTATTTTTCAGGAACTATCGAACGCGTCATTTTCGAAAACGCTAGTAATTTTTTCCGTATTCTACTCTT
AGAAATTGACGAAACAGACAGTGATTTTGAGGACTATGAAATCATTGTTACAGGAACCATGGGAGATGTCATGGAAGGTG
AAGATTATACCTTCTGGGGTCAGCTAACCAATCATCCCAAATATGGTGAACAACTCCAAATGACGCGCTACGAACGGTCA
AAACCTTCTGCTAGCGGTCTTATCAAGTATTTCGCTAGCGACAATTTTAAGGGGATTGGTAAGAAAACAGCTGAGCGTAT
TGTCGAGATTTATGGCGAAGACCCAATTGACCAGATTCTCGAGGATCCTAGCAAGTTAGAACAGATTCCTAACCTTTCAA
AGGTAAACCGAGAAGCCTTCGTTGCAAAGTTAAAAATCAACTATGGAACCGAGCAAATCTTGTCCAAACTTTCCAACTAT
GGACTCACACCAAAAGCTGCCTCACAAATTTTCAACCAATATAAGGAAGAATCGCTCAACCTTATCGAAGAACACCCTTA
TCTCTTGGTAGAGGAAGTTCAAGGAATCGGATTTAAAATAGCTGACCAACTAGCCGAACGCTTAGGAATTGCTAGTGATG
CTCCTGAACGTTTACGAGCTGCCTTGATTCATTGTCTGCTAGAAGCCAGTATGGAAGAAGGCGACACCTACATCGAAGCC
AAAGCTTTGCTCGAACGAACTATCATCCTTTTGGAAAGTGCTCGTCAGATTGAACTTGACCCTGCCTTGGTCGCTAAGGA
ATTAACCAATCTCATCCAAGAGGATAAAGTGCAAAATATAGAAACTAAAATCTTTGATAATACCCTATATTTTGCGGAAC
AGGGTATCTATACCCACCTAACTCGTATCATAAAAGACCAACCTGACATCAGTGCAGAGGACAAAATCCAAGCAAGTCTT
GAAGAGGTGGAAGAGGAGCTTGGTATTACTTATGATAAGGTTCAAAAAGATGCCATTATCAAAGCCCTACAAAGCAAGGT
CTTCATCCTGACAGGTGGTCCCGGGACAGGTAAAACCACCGTTATTAACGGAATCATTAAAACTTATGCCGACCTTCATG
GTCTAGATCTCAAGAAGTCTGATTTGCCTATTATTTTAGCGGCACCAACAGGACGGGCTGCTCGTCGGATGAACGAACTC
ACCCAACTCCCTAGCGCCACTATCCATAGACATTTGGGACTCAATAGCGAAGACGATTTCAAGACCTTAGAGGACTATCT
CGATTGCGACTTGATTATCATCGATGAGTTTTCTATGGTTGATACTTGGTTGGCCAATCAACTCTTTGAAAGTATCTCTG
ATTCAACCCAAGTCATCATTGTGGGTGACCAAGACCAACTGCCTTCCGTAGGTCCTGGCCAGGTCTTGGCTGACCTTTTG
CAGATTGATGACTTGCCTAAGGTTTCTCTGACCAAAATTTTCAGACAATCCGAGGATTCCACCATCGTTACTTTAGCTAG
TCAGATGCGCCAAGGCCAACTCCCCGCTGATTTCACAGAGAAAAAGGCTGACCGCTCTTACTTTGAGGCCAATGCCAACC
ATATTCCACAGATGGTTCCTAAAATTGTCTCTGCCGCTATAAAGAGCGGAATCGCTGCTCAGGATGTTCAGATTCTAGCT
CCCATGTACCGAGGACAGGCTGGTATTAACAATCTCAACACCATTATGCAGGACCTACTTAATCCTCAAGAAAAGGCCAA
TCAGTTTGCCTTTAATGACATTTTCTTCCGTAAGAACGACAAAATTCTCCATCTGGTCAACGATACCGAACTCAATGTCT
TCAATGGCGACATCGGCATCATTACTGATCTCATCCCTGGTAAATATACTGAAAGCAAGCAGGACGAAATTTACATGTCC
TTCGATGGCAATGAGGTTATCTATCCTCGTAACGAATGGAATAAGATTACTCTGGCCTATGCCATGTCAATCCACAAATC
CCAAGGGAGTGAGTTCCCAGTCGTTATCCTTCCCATCACACGACAAAGTGGACGTATGCTACAACGTAACCTCATCTACA
CCGCCATCACACGTGCCAAGAGTAAGCTAGTCATGTTAGGAGAAATCGCAGCCTTTGATTATGCCGTTCGCAACGAGGGG
GCTAAACGAAATACTTTTCTCATCCAACGTTTTGAACAAACTTATACACAAGCTGTTGATAAGTCTGTCGAAAAGATTGT
TAAAAACCTGGCAACAGAGGCACCCAATCAAACAAAAACGAAGAACAACTACCCCTCAGAAACCTTTGAAAACAAAGACT
TCTCGGAAAATATCAATCCATCCCAAAATCTTGTTAACACTTATTCACAACCTGTGGATAAGTCTGTTAACAAACCTGTG
CAAACAGAAGAAAACTATCGTTTAACTGAAGAAAATTGGGCAACTATAGATCCAATGATTGGTCTCAGTGAAGACGATAT
TGCTGCCTTTTTTAACAACAACTAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (147-237)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (659-705)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (572-638)

• AAA domain (AAA_30) (331-523)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	44.473	92.206	0.41