Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   NX99_RS01070 Genome accession   NZ_CP015282
Coordinates   325654..327402 (+) Length   582 a.a.
NCBI ID   WP_022496707.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 27945     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 320654..332402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX99_RS01050 (NX99_01040) glyA 321047..322297 (+) 1251 WP_084914448.1 serine hydroxymethyltransferase -
  NX99_RS01055 (NX99_01045) - 322304..323281 (+) 978 WP_073686358.1 nucleoid-associated protein -
  NX99_RS01060 (NX99_01050) - 323283..323894 (+) 612 WP_037597899.1 lysozyme family protein -
  NX99_RS01065 (NX99_01055) - 323925..325664 (+) 1740 WP_022496708.1 ABC transporter ATP-binding protein -
  NX99_RS01070 (NX99_01060) rcrQ 325654..327402 (+) 1749 WP_022496707.1 ABC transporter ATP-binding protein Regulator
  NX99_RS01075 (NX99_01065) - 327579..327710 (+) 132 WP_002885174.1 teichoic acid D-Ala incorporation-associated protein DltX -
  NX99_RS01080 (NX99_01070) dltA 327719..329269 (+) 1551 WP_002891151.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -
  NX99_RS01085 (NX99_01075) dltB 329266..330513 (+) 1248 WP_084914450.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  NX99_RS01090 (NX99_01080) dltC 330531..330770 (+) 240 WP_002891149.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  NX99_RS01095 (NX99_01085) dltD 330763..332031 (+) 1269 WP_084914451.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65382.88 Da        Isoelectric Point: 7.9740

>NTDB_id=152987 NX99_RS01070 WP_022496707.1 325654..327402(+) (rcrQ) [Streptococcus salivarius strain ATCC 27945]
MKARSNKSTLKRLSRDILSQRYLFALATVGTIIQVALTVYLPILIGDAVDAVLKMNAVLLMSRLIWQMLVVILANSAIQW
LNPLIYNRLIYSYSESLRERVMMKIHAMPLSYLDRQGTGDMVSRVTTDSDQLNNGLLMVFNQFFVGLLTIFVIIITMARL
DWFMMLLVLVMTPLSMLVARFIAKKSYQLYRNQTKWRGMQTQLIEESLTQEALVQSLNAQDQMVRSFKDVNGKYADYSQG
AIFYSSAVNPATRFVNSLIYALIAGVGAYRIMSGGAFTVGQLTTFLNYVTQYTKPYNDISSVLSELQSALACADRLYMIL
DEKEITETGKAVLEEADVQGRFQFDHVQFGYLPNKPLIKDLSIDIPAASTVAIVGPTGAGKSTLINLLMRFYDLDKGNIL
LDGRPITDYTRESLRKQIGMVLQETWLEVGTIHDNIAYGNPEASREEVIAAAKAANADFFIQQLPQGYDTYLNDAGQSLS
QGQRQLLTIARIFVNVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTIENADLILVMNNGDIVEHGTH
EQLMQAKGMYYRMQTAQKTQNS

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=152987 NX99_RS01070 WP_022496707.1 325654..327402(+) (rcrQ) [Streptococcus salivarius strain ATCC 27945]
ATGAAGGCTAGAAGTAATAAATCAACGCTTAAACGTTTAAGTAGAGATATCTTGAGTCAGCGTTACCTCTTTGCCTTAGC
AACTGTTGGGACCATTATTCAAGTTGCCTTAACGGTTTACTTACCTATCTTAATTGGTGATGCAGTTGACGCTGTTCTTA
AGATGAACGCCGTTCTATTGATGTCACGTTTAATTTGGCAGATGCTTGTAGTTATCTTAGCTAATAGTGCAATCCAGTGG
CTTAACCCTTTGATTTATAATCGATTGATTTATTCATATAGCGAAAGTTTACGTGAACGAGTCATGATGAAAATTCATGC
TATGCCTCTTAGTTACCTTGATCGTCAAGGAACTGGAGACATGGTTAGCCGTGTGACTACAGATAGCGATCAGTTAAACA
ACGGACTTCTCATGGTCTTTAACCAATTTTTCGTTGGGCTTTTGACTATCTTTGTCATAATCATTACCATGGCTCGCTTA
GACTGGTTCATGATGCTCTTAGTTCTAGTGATGACGCCTTTGTCAATGCTTGTGGCACGTTTTATCGCAAAGAAGAGCTA
CCAACTCTATCGCAATCAAACCAAATGGCGAGGCATGCAGACTCAGTTGATTGAGGAAAGTCTAACTCAAGAAGCTTTAG
TACAGAGTCTAAATGCTCAAGACCAGATGGTTAGGAGTTTTAAAGACGTCAATGGTAAGTATGCTGATTATTCACAGGGT
GCTATCTTTTATTCGTCAGCGGTTAACCCAGCTACACGTTTTGTCAATAGTCTGATCTATGCTCTCATTGCTGGTGTTGG
TGCCTATCGAATCATGTCGGGTGGTGCCTTTACAGTGGGACAATTGACTACCTTCCTAAACTATGTGACTCAGTATACGA
AACCTTATAATGATATCTCATCTGTTCTATCTGAACTTCAAAGTGCTTTGGCCTGTGCTGATCGCCTTTATATGATATTG
GATGAAAAGGAAATAACAGAAACAGGTAAGGCGGTCTTGGAAGAAGCAGATGTGCAGGGACGTTTTCAATTTGATCATGT
CCAATTTGGCTATTTGCCTAATAAACCTCTTATCAAGGATTTGAGTATTGATATCCCTGCCGCAAGTACTGTTGCCATTG
TTGGCCCTACAGGAGCGGGAAAATCTACCTTGATTAACCTGCTCATGCGTTTCTATGATTTGGACAAGGGGAACATTCTA
CTGGACGGTAGACCTATTACAGATTATACCCGTGAGAGTCTTCGGAAACAGATTGGGATGGTTTTGCAGGAAACTTGGCT
TGAGGTCGGCACTATTCATGATAATATTGCCTATGGTAATCCAGAAGCCAGTCGTGAAGAAGTCATAGCAGCGGCCAAGG
CTGCCAATGCAGATTTCTTTATTCAGCAGTTGCCTCAAGGTTATGACACCTACTTGAATGATGCGGGACAATCCCTTTCT
CAGGGACAACGTCAGCTTTTGACCATTGCCCGCATATTTGTCAATGTGCCTAAAATCTTAATCTTGGATGAAGCCACTTC
TAGTATCGATACCCGTACAGAGCTCCTCATTCAAGAGGCCTTCGCTAAATTAATGAAAGGTCGAACAAGTTTCATCATTG
CCCATCGATTGTCTACCATCGAGAATGCGGACCTTATTTTGGTCATGAATAATGGGGATATCGTTGAACACGGAACCCAT
GAACAACTGATGCAAGCTAAGGGAATGTACTATCGTATGCAGACGGCCCAAAAGACACAAAATAGTTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-294)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.396

100

0.387