Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   AEI07_RS06780 Genome accession   NZ_CP012243
Coordinates   1284557..1285072 (-) Length   171 a.a.
NCBI ID   WP_002872668.1    Uniprot ID   A0A5Y9KN14
Organism   Campylobacter jejuni strain CJ512CC45     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1279557..1290072
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI07_RS06760 (AEI07_06770) - 1280520..1282379 (+) 1860 WP_072238655.1 motility associated factor glycosyltransferase family protein -
  AEI07_RS06765 (AEI07_06775) - 1282392..1282547 (+) 156 Protein_1334 hypothetical protein -
  AEI07_RS06770 (AEI07_06780) - 1282563..1283306 (-) 744 Protein_1335 6-hydroxymethylpterin diphosphokinase MptE-like protein -
  AEI07_RS06775 (AEI07_06785) - 1283316..1284557 (-) 1242 WP_052836209.1 DUF2920 family protein -
  AEI07_RS06780 (AEI07_06790) ctsG 1284557..1285072 (-) 516 WP_002872668.1 type II secretion system protein Machinery gene
  AEI07_RS06785 (AEI07_06795) tsaD 1285073..1286080 (-) 1008 WP_052785486.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  AEI07_RS06790 (AEI07_06800) - 1286077..1287471 (-) 1395 WP_052777897.1 M99 family carboxypeptidase catalytic domain-containing protein -
  AEI07_RS06795 (AEI07_06805) dxr 1287473..1288543 (-) 1071 WP_052776152.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AEI07_RS06800 (AEI07_06810) cdsA 1288540..1289265 (-) 726 WP_002858027.1 phosphatidate cytidylyltransferase -
  AEI07_RS06805 (AEI07_06815) - 1289274..1289612 (-) 339 WP_022552380.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18675.56 Da        Isoelectric Point: 7.1357

>NTDB_id=152918 AEI07_RS06780 WP_002872668.1 1284557..1285072(-) (ctsG) [Campylobacter jejuni strain CJ512CC45]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLRSIKTMSNVSGIENVDLGN
FNGAKEVNFRVGDDKECLKLVFVNKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=152918 AEI07_RS06780 WP_002872668.1 1284557..1285072(-) (ctsG) [Campylobacter jejuni strain CJ512CC45]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCGGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGATCTATAAAAACGATGAGTAATGTAAGCGGGATTGAAAATGTCGATCTTGGCAAT
TTTAATGGCGCAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTGTAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGCAATAAAGCTTGTGTGATTTTAAGCAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Y9KN14

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment