Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   AEI12_RS06300 Genome accession   NZ_CP012230
Coordinates   1219148..1219663 (-) Length   171 a.a.
NCBI ID   WP_022552375.1    Uniprot ID   A0A610RG54
Organism   Campylobacter jejuni strain CJ517CC45     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1214148..1224663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI12_RS06285 (AEI12_06315) - 1214260..1216077 (-) 1818 WP_022552372.1 motility associated factor glycosyltransferase family protein -
  AEI12_RS06290 (AEI12_06320) - 1216074..1217897 (-) 1824 WP_022552373.1 motility associated factor glycosyltransferase family protein -
  AEI12_RS06295 (AEI12_06325) - 1217907..1219148 (-) 1242 WP_022552374.1 DUF2920 family protein -
  AEI12_RS06300 (AEI12_06330) ctsG 1219148..1219663 (-) 516 WP_022552375.1 type II secretion system protein Machinery gene
  AEI12_RS06305 (AEI12_06335) tsaD 1219664..1220671 (-) 1008 WP_022552376.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  AEI12_RS06310 (AEI12_06340) - 1220668..1222062 (-) 1395 WP_022552377.1 M99 family carboxypeptidase catalytic domain-containing protein -
  AEI12_RS06315 (AEI12_06345) dxr 1222064..1223134 (-) 1071 WP_022552378.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AEI12_RS06320 (AEI12_06350) cdsA 1223131..1223856 (-) 726 WP_022552379.1 phosphatidate cytidylyltransferase -
  AEI12_RS06325 (AEI12_06355) - 1223865..1224203 (-) 339 WP_022552380.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18662.60 Da        Isoelectric Point: 7.1355

>NTDB_id=152679 AEI12_RS06300 WP_022552375.1 1219148..1219663(-) (ctsG) [Campylobacter jejuni strain CJ517CC45]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVKFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFISSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=152679 AEI12_RS06300 WP_022552375.1 1219148..1219663(-) (ctsG) [Campylobacter jejuni strain CJ517CC45]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGTACAAAAGAAGTAAAATTTCGCGTAGGTGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTATAAGCTCTTCTAGTAACAAAGCTTGCGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A610RG54

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

92.982

100

0.93

Multiple sequence alignment