Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   AEI03_RS05250 Genome accession   NZ_CP012229
Coordinates   1024643..1025158 (-) Length   171 a.a.
NCBI ID   WP_052794242.1    Uniprot ID   A0AAN3QXH2
Organism   Campylobacter jejuni strain CJ508CC45     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1019643..1030158
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI03_RS05235 (AEI03_05255) - 1019747..1021564 (-) 1818 WP_126393833.1 motility associated factor glycosyltransferase family protein -
  AEI03_RS05240 (AEI03_05260) - 1021561..1023384 (-) 1824 WP_126393835.1 motility associated factor glycosyltransferase family protein -
  AEI03_RS05245 (AEI03_05265) - 1023394..1024643 (-) 1250 Protein_1027 DUF2920 family protein -
  AEI03_RS05250 (AEI03_05270) ctsG 1024643..1025158 (-) 516 WP_052794242.1 type II secretion system protein Machinery gene
  AEI03_RS05255 (AEI03_05275) tsaD 1025159..1026166 (-) 1008 WP_052861639.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  AEI03_RS05260 (AEI03_05280) - 1026163..1027557 (-) 1395 WP_052861642.1 M99 family carboxypeptidase catalytic domain-containing protein -
  AEI03_RS05265 (AEI03_05285) dxr 1027559..1028629 (-) 1071 WP_052821042.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AEI03_RS05270 (AEI03_05290) cdsA 1028626..1029351 (-) 726 WP_052861644.1 phosphatidate cytidylyltransferase -
  AEI03_RS05275 (AEI03_05295) - 1029360..1029698 (-) 339 WP_022552380.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18650.51 Da        Isoelectric Point: 6.4693

>NTDB_id=152649 AEI03_RS05250 WP_052794242.1 1024643..1025158(-) (ctsG) [Campylobacter jejuni strain CJ508CC45]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDEKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=152649 AEI03_RS05250 WP_052794242.1 1024643..1025158(-) (ctsG) [Campylobacter jejuni strain CJ508CC45]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGAGAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment