Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   AEH97_RS06540 Genome accession   NZ_CP012222
Coordinates   1254343..1254858 (-) Length   171 a.a.
NCBI ID   WP_022552375.1    Uniprot ID   A0A610RG54
Organism   Campylobacter jejuni strain CJ007CC45     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1249343..1259858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEH97_RS06525 (AEH97_06555) - 1249455..1251272 (-) 1818 WP_022552372.1 motility associated factor glycosyltransferase family protein -
  AEH97_RS06530 (AEH97_06560) - 1251269..1253092 (-) 1824 WP_022552373.1 motility associated factor glycosyltransferase family protein -
  AEH97_RS06535 (AEH97_06565) - 1253102..1254343 (-) 1242 WP_260627263.1 DUF2920 family protein -
  AEH97_RS06540 (AEH97_06570) ctsG 1254343..1254858 (-) 516 WP_022552375.1 type II secretion system protein Machinery gene
  AEH97_RS06545 (AEH97_06575) tsaD 1254859..1255866 (-) 1008 WP_022552376.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  AEH97_RS06550 (AEH97_06580) - 1255863..1257257 (-) 1395 WP_052793655.1 M99 family carboxypeptidase catalytic domain-containing protein -
  AEH97_RS06555 (AEH97_06585) dxr 1257259..1258329 (-) 1071 WP_022552378.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AEH97_RS06560 (AEH97_06590) cdsA 1258326..1259051 (-) 726 WP_022552379.1 phosphatidate cytidylyltransferase -
  AEH97_RS06565 (AEH97_06595) - 1259060..1259398 (-) 339 WP_022552380.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18662.60 Da        Isoelectric Point: 7.1355

>NTDB_id=152544 AEH97_RS06540 WP_022552375.1 1254343..1254858(-) (ctsG) [Campylobacter jejuni strain CJ007CC45]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVKFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFISSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=152544 AEH97_RS06540 WP_022552375.1 1254343..1254858(-) (ctsG) [Campylobacter jejuni strain CJ007CC45]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGTACAAAAGAAGTAAAATTTCGCGTAGGTGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTATAAGCTCTTCTAGTAACAAAGCTTGCGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A610RG54

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

92.982

100

0.93

Multiple sequence alignment