Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   AEI23_RS07415 Genome accession   NZ_CP012221
Coordinates   1375649..1376164 (-) Length   171 a.a.
NCBI ID   WP_002875272.1    Uniprot ID   A0A5T0KSE7
Organism   Campylobacter jejuni strain CJ018CCUA     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1370649..1381164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI23_RS07385 (AEI23_07405) - 1370948..1371343 (+) 396 WP_002907857.1 conjugal transfer protein TraM -
  AEI23_RS07390 (AEI23_07410) - 1371424..1372110 (+) 687 WP_002907859.1 AAA family ATPase -
  AEI23_RS07395 (AEI23_07415) - 1372113..1372337 (+) 225 WP_052816869.1 hypothetical protein -
  AEI23_RS10125 - 1372434..1372562 (-) 129 WP_257408334.1 hypothetical protein -
  AEI23_RS07400 (AEI23_07420) - 1372717..1374141 (-) 1425 Protein_1453 motility associated factor glycosyltransferase family protein -
  AEI23_RS07405 (AEI23_07425) - 1374143..1374397 (-) 255 Protein_1454 DUF115 domain-containing protein -
  AEI23_RS07410 (AEI23_07430) - 1374407..1375649 (-) 1243 Protein_1455 DUF2920 family protein -
  AEI23_RS07415 (AEI23_07435) ctsG 1375649..1376164 (-) 516 WP_002875272.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI23_RS07420 (AEI23_07440) tsaD 1376165..1377172 (-) 1008 WP_002864246.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  AEI23_RS07425 (AEI23_07445) - 1377169..1378563 (-) 1395 WP_052814049.1 M99 family carboxypeptidase catalytic domain-containing protein -
  AEI23_RS07430 (AEI23_07450) dxr 1378565..1379635 (-) 1071 WP_002898669.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AEI23_RS07435 (AEI23_07455) cdsA 1379632..1380357 (-) 726 WP_115766856.1 phosphatidate cytidylyltransferase -
  AEI23_RS07440 (AEI23_07460) - 1380366..1380704 (-) 339 WP_002855905.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18650.51 Da        Isoelectric Point: 6.4682

>NTDB_id=152516 AEI23_RS07415 WP_002875272.1 1375649..1376164(-) (ctsG) [Campylobacter jejuni strain CJ018CCUA]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDDKECLKLLFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=152516 AEI23_RS07415 WP_002875272.1 1375649..1376164(-) (ctsG) [Campylobacter jejuni strain CJ018CCUA]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTCTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATTAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0KSE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment