Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   AEI22_RS06140 Genome accession   NZ_CP012220
Coordinates   1177909..1178424 (-) Length   171 a.a.
NCBI ID   WP_002872668.1    Uniprot ID   A0A5Y9KN14
Organism   Campylobacter jejuni strain CJ090CC1332     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1172909..1183424
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI22_RS06120 (AEI22_06100) - 1174394..1174672 (-) 279 WP_115794605.1 motility associated factor glycosyltransferase family protein -
  AEI22_RS06125 (AEI22_06105) - 1174669..1176402 (-) 1734 Protein_1188 motility associated factor glycosyltransferase family protein -
  AEI22_RS06130 (AEI22_06110) - 1176381..1176659 (-) 279 WP_115794607.1 motility associated factor glycosyltransferase family protein -
  AEI22_RS06135 (AEI22_06115) - 1176669..1177909 (-) 1241 Protein_1190 DUF2920 family protein -
  AEI22_RS06140 (AEI22_06120) ctsG 1177909..1178424 (-) 516 WP_002872668.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI22_RS06145 (AEI22_06125) tsaD 1178425..1179432 (-) 1008 WP_052785486.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  AEI22_RS06150 (AEI22_06130) - 1179429..1180823 (-) 1395 WP_052803818.1 M99 family carboxypeptidase catalytic domain-containing protein -
  AEI22_RS06155 (AEI22_06135) dxr 1180825..1181895 (-) 1071 WP_052805826.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AEI22_RS06160 (AEI22_06140) cdsA 1181892..1182617 (-) 726 WP_052861644.1 phosphatidate cytidylyltransferase -
  AEI22_RS06165 (AEI22_06145) - 1182626..1182964 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18675.56 Da        Isoelectric Point: 7.1357

>NTDB_id=152488 AEI22_RS06140 WP_002872668.1 1177909..1178424(-) (ctsG) [Campylobacter jejuni strain CJ090CC1332]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLRSIKTMSNVSGIENVDLGN
FNGAKEVNFRVGDDKECLKLVFVNKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=152488 AEI22_RS06140 WP_002872668.1 1177909..1178424(-) (ctsG) [Campylobacter jejuni strain CJ090CC1332]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCGGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGATCTATAAAAACGATGAGTAATGTAAGCGGGATTGAAAATGTCGATCTTGGCAAT
TTTAATGGCGCAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTGTAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGCAATAAAGCTTGTGTGATTTTAAGCAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Y9KN14

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment