Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   AEI20_RS07915 Genome accession   NZ_CP012217
Coordinates   1488597..1489112 (-) Length   171 a.a.
NCBI ID   WP_002799196.1    Uniprot ID   Q0P8R6
Organism   Campylobacter jejuni strain CJ071CC464     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1483597..1494112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI20_RS07885 - 1484199..1484459 (+) 261 Protein_1535 DUF115 domain-containing protein -
  AEI20_RS07890 - 1484460..1484705 (+) 246 Protein_1536 DUF115 domain-containing protein -
  AEI20_RS07895 (AEI20_07925) pseE 1484702..1486588 (+) 1887 WP_115791421.1 motility associated factor glycosyltransferase family protein -
  AEI20_RS07900 (AEI20_07930) - 1486619..1487110 (-) 492 Protein_1538 flagellin -
  AEI20_RS07905 (AEI20_07935) - 1487116..1487343 (-) 228 Protein_1539 motility associated factor glycosyltransferase family protein -
  AEI20_RS07910 (AEI20_07940) - 1487353..1488597 (-) 1245 WP_032584861.1 DUF2920 family protein -
  AEI20_RS07915 (AEI20_07945) ctsG 1488597..1489112 (-) 516 WP_002799196.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI20_RS07920 (AEI20_07950) tsaD 1489113..1490120 (-) 1008 WP_002934877.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  AEI20_RS07925 (AEI20_07955) - 1490117..1491511 (-) 1395 WP_002934878.1 M99 family carboxypeptidase catalytic domain-containing protein -
  AEI20_RS07930 (AEI20_07960) dxr 1491513..1492583 (-) 1071 WP_002860792.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AEI20_RS07935 (AEI20_07965) cdsA 1492580..1493305 (-) 726 WP_002875974.1 phosphatidate cytidylyltransferase -
  AEI20_RS07940 (AEI20_07970) - 1493314..1493652 (-) 339 WP_002934880.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18678.56 Da        Isoelectric Point: 6.4682

>NTDB_id=152464 AEI20_RS07915 WP_002799196.1 1488597..1489112(-) (ctsG) [Campylobacter jejuni strain CJ071CC464]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=152464 AEI20_RS07915 WP_002799196.1 1488597..1489112(-) (ctsG) [Campylobacter jejuni strain CJ071CC464]
ATGAAAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTGGGAATTTTAGCCGCTATTGCTTTGCCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAACAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGTTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942

Multiple sequence alignment