Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   AEI15_RS06325 Genome accession   NZ_CP012214
Coordinates   1206392..1206907 (-) Length   171 a.a.
NCBI ID   WP_002799196.1    Uniprot ID   Q0P8R6
Organism   Campylobacter jejuni strain CJ088CC52     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1201392..1211907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI15_RS06310 (AEI15_06290) - 1201508..1203316 (-) 1809 WP_115768232.1 motility associated factor glycosyltransferase family protein -
  AEI15_RS06315 (AEI15_06295) - 1203313..1205136 (-) 1824 WP_115768233.1 motility associated factor glycosyltransferase family protein -
  AEI15_RS06320 (AEI15_06300) - 1205146..1206392 (-) 1247 Protein_1236 DUF2920 family protein -
  AEI15_RS06325 (AEI15_06305) ctsG 1206392..1206907 (-) 516 WP_002799196.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI15_RS06330 (AEI15_06310) tsaD 1206908..1207915 (-) 1008 WP_002884179.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  AEI15_RS06335 (AEI15_06315) - 1207912..1209306 (-) 1395 WP_002853606.1 M99 family carboxypeptidase catalytic domain-containing protein -
  AEI15_RS06340 (AEI15_06320) dxr 1209308..1210378 (-) 1071 WP_002884178.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AEI15_RS06345 (AEI15_06325) cdsA 1210375..1211100 (-) 726 WP_002884177.1 phosphatidate cytidylyltransferase -
  AEI15_RS06350 (AEI15_06330) - 1211109..1211447 (-) 339 WP_002875268.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18678.56 Da        Isoelectric Point: 6.4682

>NTDB_id=152381 AEI15_RS06325 WP_002799196.1 1206392..1206907(-) (ctsG) [Campylobacter jejuni strain CJ088CC52]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=152381 AEI15_RS06325 WP_002799196.1 1206392..1206907(-) (ctsG) [Campylobacter jejuni strain CJ088CC52]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAACGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGTGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0P8R6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

94.152

100

0.942

Multiple sequence alignment