Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   AEI08_RS06345 Genome accession   NZ_CP012213
Coordinates   1212930..1213445 (-) Length   171 a.a.
NCBI ID   WP_022552375.1    Uniprot ID   A0A610RG54
Organism   Campylobacter jejuni strain CJ513CC45     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1207930..1218445
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI08_RS06330 (AEI08_06290) - 1208043..1209860 (-) 1818 WP_022552372.1 motility associated factor glycosyltransferase family protein -
  AEI08_RS06335 (AEI08_06295) - 1209857..1211680 (-) 1824 WP_022552373.1 motility associated factor glycosyltransferase family protein -
  AEI08_RS06340 (AEI08_06300) - 1211690..1212930 (-) 1241 Protein_1228 DUF2920 family protein -
  AEI08_RS06345 (AEI08_06305) ctsG 1212930..1213445 (-) 516 WP_022552375.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  AEI08_RS06350 (AEI08_06310) tsaD 1213446..1214453 (-) 1008 WP_022552376.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  AEI08_RS06355 (AEI08_06315) - 1214450..1215844 (-) 1395 WP_052793655.1 M99 family carboxypeptidase catalytic domain-containing protein -
  AEI08_RS06360 (AEI08_06320) dxr 1215846..1216916 (-) 1071 WP_022552378.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AEI08_RS06365 (AEI08_06325) cdsA 1216913..1217638 (-) 726 WP_022552379.1 phosphatidate cytidylyltransferase -
  AEI08_RS06370 (AEI08_06330) - 1217647..1217985 (-) 339 WP_022552380.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18662.60 Da        Isoelectric Point: 7.1355

>NTDB_id=152354 AEI08_RS06345 WP_022552375.1 1212930..1213445(-) (ctsG) [Campylobacter jejuni strain CJ513CC45]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVKFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFISSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=152354 AEI08_RS06345 WP_022552375.1 1212930..1213445(-) (ctsG) [Campylobacter jejuni strain CJ513CC45]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGTACAAAAGAAGTAAAATTTCGCGTAGGTGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTATAAGCTCTTCTAGTAACAAAGCTTGCGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A610RG54

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

92.982

100

0.93

Multiple sequence alignment