Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   AEI05_RS07120 Genome accession   NZ_CP012205
Coordinates   1348139..1348654 (-) Length   171 a.a.
NCBI ID   WP_038816943.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CJ510CC45     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1343139..1353654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AEI05_RS07095 (AEI05_07115) - 1344005..1344262 (-) 258 Protein_1396 DUF115 domain-containing protein -
  AEI05_RS07100 (AEI05_07120) - 1344272..1345513 (-) 1242 WP_022552374.1 DUF2920 family protein -
  AEI05_RS07105 (AEI05_07125) ctsG 1345513..1346028 (-) 516 WP_022552375.1 type II secretion system protein Machinery gene
  AEI05_RS07110 (AEI05_07130) - 1346028..1346879 (-) 852 Protein_1399 6-hydroxymethylpterin diphosphokinase MptE-like protein -
  AEI05_RS07115 (AEI05_07135) - 1346889..1348139 (-) 1251 WP_002903861.1 DUF2920 family protein -
  AEI05_RS07120 (AEI05_07140) ctsG 1348139..1348654 (-) 516 WP_038816943.1 type II secretion system protein Machinery gene
  AEI05_RS07125 (AEI05_07145) tsaD 1348655..1349662 (-) 1008 WP_260511597.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  AEI05_RS07130 (AEI05_07150) - 1349659..1350360 (-) 702 Protein_1403 M99 family metallo-carboxypeptidase C-terminal domain-containing protein -
  AEI05_RS07135 (AEI05_07155) - 1350369..1351313 (-) 945 Protein_1404 M99 family carboxypeptidase catalytic domain-containing protein -
  AEI05_RS07140 (AEI05_07160) dxr 1351315..1352385 (-) 1071 WP_022552378.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  AEI05_RS07145 (AEI05_07165) - 1352382..1352969 (-) 588 Protein_1406 phosphatidate cytidylyltransferase -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18664.58 Da        Isoelectric Point: 7.1355

>NTDB_id=152221 AEI05_RS07120 WP_038816943.1 1348139..1348654(-) (ctsG) [Campylobacter jejuni strain CJ510CC45]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKKDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDDKECLKLLFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=152221 AEI05_RS07120 WP_038816943.1 1348139..1348654(-) (ctsG) [Campylobacter jejuni strain CJ510CC45]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAACGATATAAGCATTT
ATACTTTAAAAAAGGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTCTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATTAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

92.982

100

0.93

Multiple sequence alignment