Detailed information NTG0150320

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: B14_RS07890
• Genome accession: NZ_CP014842
• Coordinates: 1543696..1544961 (-)
• Length: 421 a.a.
• NCBI ID: WP_017474364.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain SCDB 14
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1538696..1549961

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B14_RS22665 (B14_01582)	-	1538821..1538985 (+)	165	WP_003183953.1	YrzK family protein	-
B14_RS07870 (B14_01583)	hisS	1539360..1540634 (+)	1275	WP_003183951.1	histidine--tRNA ligase	-
B14_RS07875 (B14_01584)	aspS	1540649..1542427 (+)	1779	WP_003183949.1	aspartate--tRNA ligase	-
B14_RS07885 (B14_01585)	-	1542847..1543611 (+)	765	WP_003183947.1	tRNA threonylcarbamoyladenosine dehydratase	-
B14_RS07890 (B14_01586)	rarA	1543696..1544961 (-)	1266	WP_017474364.1	replication-associated recombination protein A	Machinery gene
B14_RS07895 (B14_01587)	cymR	1545600..1546016 (+)	417	WP_003183943.1	cysteine metabolism transcriptional regulator CymR	-
B14_RS07900 (B14_01588)	-	1546037..1547176 (+)	1140	WP_003183940.1	cysteine desulfurase family protein	-
B14_RS07905 (B14_01589)	mnmA	1547282..1548400 (+)	1119	WP_003183938.1	tRNA 2-thiouridine(34) synthase MnmA	-
B14_RS07910 (B14_01590)	-	1548494..1549144 (+)	651	WP_003183935.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46288.25 Da
• Isoelectric Point: 7.6230

>NTDB_id=150320 B14_RS07890 WP_017474364.1 1543696..1544961(-) (rarA) [Bacillus licheniformis strain SCDB 14]
MKPLAFRMRPTKIEEVLGQDHLVGEGKIIHRMVQAKHLSSMILYGAPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
AIAAEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIIMIGATTANPYHAINPAIRSRTQIFELHPLDPEQIKTAIKR
ALEDKHRGLGSYDVAVDDEALDHLARGCGGDVRSALNALELAVLSTKENSEGAIRITLEIAEECLQKKGFVHDKDGDAHY
DVISAFQKSIRGSDVNAALHYMARLIEAGDLESLARRLLVIAYEDVGLASPQAGGRTLQAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAILAVDEALSDVRSGKIGDVPNHLKDAHYKGAAELGRGVEYKYPHDYENGWVKQQYLPDPLKNKVYYQP
KQTGKFELALKQVYDKLMKQK

Nucleotide

• Length: 1266 bp

>NTDB_id=150320 B14_RS07890 WP_017474364.1 1543696..1544961(-) (rarA) [Bacillus licheniformis strain SCDB 14]
ATGAAACCACTCGCATTTCGAATGCGCCCTACAAAAATCGAAGAGGTTCTCGGCCAGGATCACCTGGTCGGGGAAGGAAA
GATCATTCATCGGATGGTGCAGGCCAAACACCTTTCATCGATGATTCTGTACGGCGCCCCGGGCATCGGCAAAACGTCGA
TCGCCACGGCGATTGCCGGCAGCACGAGCATCGCTTTCCGAAAGCTGAACGCAGTCATCAATAATAAAAAGGATATGGAA
GCCATTGCCGCCGAAGCAAAAATGTCGGGGCAGGTTATCTTAATCCTTGATGAGGTGCACCGGCTTGACAAAGGCAAGCA
GGACTTTCTCCTTCCGTATTTGGAAAACGGCATGATTATCATGATCGGGGCGACGACAGCCAACCCGTACCATGCGATCA
ATCCGGCGATCAGAAGCAGAACGCAGATTTTCGAGCTGCATCCGTTAGACCCTGAACAAATCAAAACGGCCATTAAACGG
GCGCTTGAAGATAAACACAGAGGCCTCGGTTCGTATGACGTTGCCGTCGATGATGAGGCGCTTGACCATTTGGCCCGCGG
CTGCGGCGGAGATGTCCGCTCAGCTTTGAATGCGCTCGAACTTGCCGTATTGTCCACAAAGGAAAACAGTGAGGGAGCGA
TACGCATTACATTGGAAATCGCAGAAGAATGCCTGCAGAAAAAAGGCTTTGTCCATGACAAAGATGGAGACGCGCATTAT
GATGTCATTTCCGCCTTCCAAAAATCAATCAGAGGCTCTGATGTCAATGCTGCACTGCACTACATGGCAAGGCTTATTGA
AGCGGGGGATTTGGAAAGCCTTGCACGGAGGCTGCTTGTTATCGCCTATGAGGATGTCGGGCTGGCGAGTCCGCAGGCTG
GTGGAAGAACGCTTCAAGCCATTCAAACGGCGGAACGAATCGGATTTCCGGAAGCGAGGATTCCGCTGGCCAACGCCGTG
ATTGAGCTCTGCCTGTCTCCTAAATCGAACTCGGCGATCCTTGCAGTTGACGAAGCGCTGTCAGACGTCCGCTCCGGAAA
GATCGGCGATGTGCCGAACCATTTAAAGGACGCCCATTACAAAGGAGCCGCTGAGCTTGGCAGAGGTGTGGAATACAAAT
ATCCGCACGATTACGAGAACGGCTGGGTCAAACAGCAGTACCTGCCTGATCCGCTGAAAAACAAAGTTTACTATCAGCCG
AAGCAGACGGGAAAATTTGAACTCGCACTGAAACAAGTATACGACAAGCTGATGAAACAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-127)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	85.273	100	0.853