Detailed information NTG0150155

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: BaDB11_RS05355
• Genome accession: NZ_CP014795
• Coordinates: 962314..963579 (+)
• Length: 421 a.a.
• NCBI ID: WP_017474364.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain SCK B11
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 957314..968579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BaDB11_RS05335 (BaDB11_01074)	-	958196..958846 (-)	651	WP_003183935.1	tetratricopeptide repeat protein	-
BaDB11_RS05340 (BaDB11_01075)	mnmA	958940..960058 (-)	1119	WP_003183938.1	tRNA 2-thiouridine(34) synthase MnmA	-
BaDB11_RS05345 (BaDB11_01076)	-	960164..961303 (-)	1140	WP_003183940.1	cysteine desulfurase family protein	-
BaDB11_RS05350 (BaDB11_01077)	cymR	961324..961740 (-)	417	WP_003183943.1	cysteine metabolism transcriptional regulator CymR	-
BaDB11_RS05355 (BaDB11_01078)	rarA	962314..963579 (+)	1266	WP_017474364.1	replication-associated recombination protein A	Machinery gene
BaDB11_RS05360 (BaDB11_01079)	-	963664..964428 (-)	765	WP_003183947.1	tRNA threonylcarbamoyladenosine dehydratase	-
BaDB11_RS05370 (BaDB11_01080)	aspS	964848..966626 (-)	1779	WP_003183949.1	aspartate--tRNA ligase	-
BaDB11_RS05375 (BaDB11_01081)	hisS	966641..967915 (-)	1275	WP_003183951.1	histidine--tRNA ligase	-
BaDB11_RS22610 (BaDB11_01082)	-	968290..968454 (-)	165	WP_003183953.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46288.25 Da
• Isoelectric Point: 7.6230

>NTDB_id=150155 BaDB11_RS05355 WP_017474364.1 962314..963579(+) (rarA) [Bacillus licheniformis strain SCK B11]
MKPLAFRMRPTKIEEVLGQDHLVGEGKIIHRMVQAKHLSSMILYGAPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
AIAAEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIIMIGATTANPYHAINPAIRSRTQIFELHPLDPEQIKTAIKR
ALEDKHRGLGSYDVAVDDEALDHLARGCGGDVRSALNALELAVLSTKENSEGAIRITLEIAEECLQKKGFVHDKDGDAHY
DVISAFQKSIRGSDVNAALHYMARLIEAGDLESLARRLLVIAYEDVGLASPQAGGRTLQAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAILAVDEALSDVRSGKIGDVPNHLKDAHYKGAAELGRGVEYKYPHDYENGWVKQQYLPDPLKNKVYYQP
KQTGKFELALKQVYDKLMKQK

Nucleotide

• Length: 1266 bp

>NTDB_id=150155 BaDB11_RS05355 WP_017474364.1 962314..963579(+) (rarA) [Bacillus licheniformis strain SCK B11]
ATGAAACCACTCGCATTTCGAATGCGCCCTACAAAAATCGAAGAGGTTCTCGGCCAGGATCACCTGGTCGGGGAAGGAAA
GATCATTCATCGGATGGTGCAGGCCAAACACCTTTCATCGATGATTCTGTACGGCGCCCCGGGCATCGGCAAAACGTCGA
TCGCCACGGCGATTGCCGGCAGCACGAGCATCGCTTTCCGAAAGCTGAACGCAGTCATCAATAATAAAAAGGATATGGAA
GCCATTGCCGCCGAAGCAAAAATGTCGGGGCAGGTTATCTTAATCCTTGATGAGGTGCACCGGCTTGACAAAGGCAAGCA
GGACTTTCTCCTTCCGTATTTGGAAAACGGCATGATTATCATGATCGGGGCGACGACAGCCAACCCGTACCATGCGATCA
ATCCGGCGATCAGAAGCAGAACGCAGATTTTCGAGCTGCATCCGTTAGACCCTGAACAAATCAAAACGGCCATTAAACGG
GCGCTTGAAGATAAACACAGAGGCCTCGGTTCGTATGACGTTGCCGTCGATGATGAGGCGCTTGACCATTTGGCCCGCGG
CTGCGGCGGAGATGTCCGCTCAGCTTTGAATGCGCTCGAACTTGCCGTATTGTCCACAAAGGAAAACAGTGAGGGAGCGA
TACGCATTACATTGGAAATCGCAGAAGAATGCCTGCAGAAAAAAGGCTTTGTCCATGACAAAGATGGAGACGCGCATTAT
GATGTCATTTCCGCCTTCCAAAAATCAATCAGAGGCTCTGATGTCAATGCTGCACTGCACTACATGGCAAGGCTTATTGA
AGCGGGGGATTTGGAAAGCCTTGCACGGAGGCTGCTTGTTATCGCCTATGAGGATGTCGGGCTGGCGAGTCCGCAGGCTG
GTGGAAGAACGCTTCAAGCCATTCAAACGGCGGAACGAATCGGATTTCCGGAAGCGAGGATTCCGCTGGCCAACGCCGTG
ATTGAGCTCTGCCTGTCTCCTAAATCGAACTCGGCGATCCTTGCAGTTGACGAAGCGCTGTCAGACGTCCGCTCCGGAAA
GATCGGCGATGTGCCGAACCATTTAAAGGACGCCCATTACAAAGGAGCCGCTGAGCTTGGCAGAGGTGTGGAATACAAAT
ATCCGCACGATTACGAGAACGGCTGGGTCAAACAGCAGTACCTGCCTGATCCGCTGAAAAACAAAGTTTACTATCAGCCG
AAGCAGACGGGAAAATTTGAACTCGCACTGAAACAAGTATACGACAAGCTGATGAAACAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-127)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	85.273	100	0.853