Detailed information NTG0149888

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: B34_RS07505
• Genome accession: NZ_CP014793
• Coordinates: 1363207..1364472 (+)
• Length: 421 a.a.
• NCBI ID: WP_009327776.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain SCDB 34
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1358207..1369472

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B34_RS07485 (B34_01510)	-	1359088..1359738 (-)	651	WP_003183935.1	tetratricopeptide repeat protein	-
B34_RS07490 (B34_01511)	mnmA	1359832..1360950 (-)	1119	WP_003183938.1	tRNA 2-thiouridine(34) synthase MnmA	-
B34_RS07495 (B34_01512)	-	1361056..1362195 (-)	1140	WP_009327778.1	cysteine desulfurase family protein	-
B34_RS07500 (B34_01513)	cymR	1362216..1362632 (-)	417	WP_003183943.1	cysteine metabolism transcriptional regulator CymR	-
B34_RS07505 (B34_01514)	rarA	1363207..1364472 (+)	1266	WP_009327776.1	replication-associated recombination protein A	Machinery gene
B34_RS07510 (B34_01515)	-	1364557..1365321 (-)	765	WP_003183947.1	tRNA threonylcarbamoyladenosine dehydratase	-
B34_RS07520 (B34_01516)	aspS	1365741..1367519 (-)	1779	WP_009327775.1	aspartate--tRNA ligase	-
B34_RS07525 (B34_01517)	hisS	1367534..1368808 (-)	1275	WP_003183951.1	histidine--tRNA ligase	-
B34_RS23700 (B34_01518)	-	1369183..1369347 (-)	165	WP_003183953.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46314.29 Da
• Isoelectric Point: 7.6230

>NTDB_id=149888 B34_RS07505 WP_009327776.1 1363207..1364472(+) (rarA) [Bacillus licheniformis strain SCDB 34]
MKPLAFRMRPTKIEEVLGQDHLVGEGKIIHRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
AIAAEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIIMIGATTANPYHAINPAIRSRTQIFELHPLDPEQIKTAIKR
ALEDKHRGLGSYDVAVDDEALDHLARGCGGDVRSALNALELAVLSTKENSEGAIRITLEIAEECLQKKGFVHDKDGDAHY
DVISAFQKSIRGSDVNAALHYMARLIEAGDLESLARRLLVIAYEDVGLASPQAGGRTLQAIQTAERIGFPEARIPLANAV
IELCLSPKSNSAILAVDEALSDVRSGKIGDVPNHLKDAHYKGAAELGRGVEYKYPHDYENGWVKQQYLPDPLKNKVYYQP
KQTGKFELALKQVYDKLMKQK

Nucleotide

• Length: 1266 bp

>NTDB_id=149888 B34_RS07505 WP_009327776.1 1363207..1364472(+) (rarA) [Bacillus licheniformis strain SCDB 34]
ATGAAACCACTCGCATTTCGAATGCGCCCTACAAAAATCGAAGAGGTTCTCGGCCAGGATCACCTGGTCGGGGAAGGAAA
GATCATTCATCGGATGGTGCAGGCCAAACACCTTTCATCGATGATTCTGTACGGCCCCCCGGGCATCGGCAAAACGTCGA
TCGCCACGGCGATTGCCGGCAGCACGAGCATCGCTTTCCGAAAGCTGAACGCAGTCATCAATAATAAAAAGGATATGGAA
GCCATTGCCGCCGAAGCAAAAATGTCGGGGCAGGTTATCTTAATCCTTGATGAGGTGCACCGGCTTGACAAAGGCAAGCA
GGACTTTCTCCTTCCGTATTTGGAAAACGGCATGATTATCATGATCGGGGCGACGACAGCCAACCCGTACCATGCGATCA
ATCCGGCGATCAGAAGCAGAACGCAGATTTTCGAGCTGCATCCGTTAGACCCTGAACAAATCAAAACGGCCATTAAACGG
GCGCTTGAAGATAAACACAGAGGCCTCGGTTCGTATGACGTTGCCGTCGATGATGAGGCGCTTGACCATTTGGCCCGCGG
CTGCGGCGGAGATGTCCGCTCAGCTTTGAATGCGCTCGAACTTGCCGTATTGTCCACAAAGGAAAACAGTGAGGGAGCGA
TACGCATTACATTGGAAATCGCAGAAGAATGCCTGCAGAAAAAAGGCTTTGTCCATGACAAAGATGGAGACGCGCATTAT
GATGTCATTTCCGCCTTCCAAAAATCAATCAGAGGCTCTGATGTCAATGCTGCACTGCACTACATGGCAAGGCTTATTGA
AGCGGGGGATTTGGAAAGCCTTGCACGGAGGCTGCTTGTTATCGCCTATGAGGATGTCGGGCTGGCGAGTCCGCAGGCTG
GTGGAAGAACGCTTCAAGCCATTCAAACGGCGGAACGAATCGGATTTCCGGAAGCGAGGATTCCGCTGGCCAACGCCGTG
ATTGAGCTCTGCCTGTCTCCTAAATCGAACTCGGCGATCCTTGCAGTTGACGAAGCGCTGTCAGACGTCCGCTCCGGAAA
GATCGGCGATGTGCCGAACCATTTAAAGGACGCCCATTACAAAGGAGCCGCTGAGCTTGGCAGAGGTGTGGAATACAAAT
ATCCGCACGATTACGAGAACGGCTGGGTCAAACAGCAGTACCTGCCTGATCCGCTGAAAAACAAAGTTTACTATCAGCCG
AAGCAGACGGGAAAATTTGAACTCGCACTGAAACAAGTATACGACAAGCTGATGAAACAAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-127)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-416)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	85.511	100	0.855