Detailed information
Bioinformatically predicted
Overview
| Name | ylbF | Type | Regulator |
| Locus tag | B34_RS00270 | Genome accession | NZ_CP014793 |
| Coordinates | 50643..51092 (+) | Length | 149 a.a. |
| NCBI ID | WP_003181503.1 | Uniprot ID | Q65K02 |
| Organism | Bacillus licheniformis strain SCDB 34 | ||
| Function | accelerate the production of Spo0A~P (predicted from homology) Competence regulation |
||
Genomic Context
Location: 45643..56092
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B34_RS00235 (B34_00048) | ctaF | 46086..46415 (+) | 330 | WP_003181487.1 | cytochrome c oxidase subunit IVB | - |
| B34_RS00240 (B34_00049) | ctaG | 46449..47348 (+) | 900 | WP_011197954.1 | cytochrome c oxidase assembly factor CtaG | - |
| B34_RS00245 (B34_00050) | - | 47405..47764 (-) | 360 | WP_003181492.1 | YugN family protein | - |
| B34_RS00250 (B34_00051) | - | 47932..48378 (+) | 447 | WP_003181494.1 | CBS domain-containing protein | - |
| B34_RS00255 (B34_00052) | - | 48519..49562 (+) | 1044 | WP_003181497.1 | CAP domain-containing protein | - |
| B34_RS00260 (B34_00053) | - | 49716..50111 (+) | 396 | WP_003181499.1 | YlbD family protein | - |
| B34_RS00265 (B34_00054) | - | 50126..50365 (+) | 240 | WP_003181501.1 | YlbE-like family protein | - |
| B34_RS00270 (B34_00055) | ylbF | 50643..51092 (+) | 450 | WP_003181503.1 | YlbF family regulator | Regulator |
| B34_RS00275 (B34_00056) | - | 51164..51436 (+) | 273 | WP_009328559.1 | YlbG family protein | - |
| B34_RS24285 (B34_00057) | - | 51546..51680 (+) | 135 | WP_254926361.1 | hypothetical protein | - |
| B34_RS00280 (B34_00058) | rsmD | 51729..52295 (+) | 567 | WP_003181507.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| B34_RS00285 (B34_00059) | coaD | 52288..52782 (+) | 495 | WP_003181508.1 | pantetheine-phosphate adenylyltransferase | - |
| B34_RS00290 (B34_00060) | ylbJ | 52791..54011 (-) | 1221 | WP_003181511.1 | sporulation integral membrane protein YlbJ | - |
| B34_RS00295 (B34_00061) | - | 54335..55357 (+) | 1023 | WP_009328558.1 | SepM family pheromone-processing serine protease | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16903.11 Da Isoelectric Point: 6.3347
>NTDB_id=149839 B34_RS00270 WP_003181503.1 50643..51092(+) (ylbF) [Bacillus licheniformis strain SCDB 34]
MFATMESLRLQNEAYDLANMILQSEAAEHYRKCYKRLREDEEAGRIIASFTKIKEQYEDVQRFGKYHPDYKEISKKMREI
KRELDLHDTVAEFKKAETELQSILDEVSVEIGHAVSKHIKVPTGNPYFDNLSSCGGGCGSGGSCGCKVS
MFATMESLRLQNEAYDLANMILQSEAAEHYRKCYKRLREDEEAGRIIASFTKIKEQYEDVQRFGKYHPDYKEISKKMREI
KRELDLHDTVAEFKKAETELQSILDEVSVEIGHAVSKHIKVPTGNPYFDNLSSCGGGCGSGGSCGCKVS
Nucleotide
Download Length: 450 bp
>NTDB_id=149839 B34_RS00270 WP_003181503.1 50643..51092(+) (ylbF) [Bacillus licheniformis strain SCDB 34]
ATGTTTGCCACAATGGAATCGTTGCGGCTTCAAAATGAAGCATATGATTTGGCCAACATGATTCTTCAATCAGAGGCGGC
TGAACATTACAGAAAATGCTACAAGCGTCTCCGCGAAGATGAAGAGGCCGGACGTATTATCGCTTCGTTTACGAAAATAA
AAGAACAGTACGAGGATGTGCAGCGCTTTGGCAAGTATCATCCTGATTATAAAGAGATATCCAAGAAAATGAGGGAAATC
AAACGGGAGCTTGACCTTCACGATACAGTAGCCGAATTTAAAAAGGCGGAAACCGAGCTGCAATCCATTCTTGATGAAGT
CAGCGTGGAAATCGGTCATGCTGTGTCAAAACATATCAAAGTACCGACTGGAAACCCTTATTTTGATAATCTTTCATCTT
GCGGCGGCGGCTGCGGGTCAGGCGGAAGCTGCGGCTGTAAAGTTTCCTGA
ATGTTTGCCACAATGGAATCGTTGCGGCTTCAAAATGAAGCATATGATTTGGCCAACATGATTCTTCAATCAGAGGCGGC
TGAACATTACAGAAAATGCTACAAGCGTCTCCGCGAAGATGAAGAGGCCGGACGTATTATCGCTTCGTTTACGAAAATAA
AAGAACAGTACGAGGATGTGCAGCGCTTTGGCAAGTATCATCCTGATTATAAAGAGATATCCAAGAAAATGAGGGAAATC
AAACGGGAGCTTGACCTTCACGATACAGTAGCCGAATTTAAAAAGGCGGAAACCGAGCTGCAATCCATTCTTGATGAAGT
CAGCGTGGAAATCGGTCATGCTGTGTCAAAACATATCAAAGTACCGACTGGAAACCCTTATTTTGATAATCTTTCATCTT
GCGGCGGCGGCTGCGGGTCAGGCGGAAGCTGCGGCTGTAAAGTTTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ylbF | Bacillus subtilis subsp. subtilis str. 168 |
84.564 |
100 |
0.846 |