Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | SpyM6D471_RS00690 | Genome accession | NZ_CP011415 |
| Coordinates | 107817..108770 (+) | Length | 317 a.a. |
| NCBI ID | WP_021340467.1 | Uniprot ID | - |
| Organism | Streptococcus pyogenes strain D471 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 102817..113770
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SpyM6D471_RS00650 (SpyM6D471_00650) | - | 103644..104009 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| SpyM6D471_RS00655 (SpyM6D471_00655) | comYA | 104102..105040 (+) | 939 | WP_002986557.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SpyM6D471_RS00660 (SpyM6D471_00660) | comYB | 104976..106010 (+) | 1035 | WP_011184088.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SpyM6D471_RS00665 (SpyM6D471_00665) | comYC | 106012..106338 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SpyM6D471_RS00670 (SpyM6D471_00670) | comGD | 106313..106741 (+) | 429 | WP_011184089.1 | competence type IV pilus minor pilin ComGD | - |
| SpyM6D471_RS00675 (SpyM6D471_00675) | comGE | 106698..106982 (+) | 285 | WP_027968839.1 | competence type IV pilus minor pilin ComGE | - |
| SpyM6D471_RS00680 (SpyM6D471_00680) | comYF | 106975..107409 (+) | 435 | WP_002986542.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SpyM6D471_RS00685 (SpyM6D471_00685) | comGG | 107393..107719 (+) | 327 | WP_002986539.1 | competence type IV pilus minor pilin ComGG | - |
| SpyM6D471_RS00690 (SpyM6D471_00690) | comYH | 107817..108770 (+) | 954 | WP_021340467.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SpyM6D471_RS00695 (SpyM6D471_00695) | - | 108829..110025 (+) | 1197 | WP_002986533.1 | acetate kinase | - |
| SpyM6D471_RS00700 (SpyM6D471_00700) | - | 110212..110520 (+) | 309 | WP_011017251.1 | hypothetical protein | - |
| SpyM6D471_RS00705 (SpyM6D471_00705) | proC | 110603..111373 (-) | 771 | WP_011184092.1 | pyrroline-5-carboxylate reductase | - |
| SpyM6D471_RS00710 (SpyM6D471_00710) | pepA | 111421..112488 (-) | 1068 | WP_011184093.1 | glutamyl aminopeptidase | - |
| SpyM6D471_RS00715 (SpyM6D471_00715) | - | 112953..113237 (+) | 285 | WP_011888537.1 | DUF4651 domain-containing protein | - |
| SpyM6D471_RS00720 (SpyM6D471_00720) | - | 113234..113551 (+) | 318 | WP_002986515.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35971.05 Da Isoelectric Point: 4.7205
>NTDB_id=145784 SpyM6D471_RS00690 WP_021340467.1 107817..108770(+) (comYH) [Streptococcus pyogenes strain D471]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFVQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFVQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=145784 SpyM6D471_RS00690 WP_021340467.1 107817..108770(+) (comYH) [Streptococcus pyogenes strain D471]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAATTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCCCATTTTGTTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAATTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCCCATTTTGTTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGGTACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCATTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTACGCTACCAGATTCTATTTTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTACAAAAACAAACAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
66.456 |
99.685 |
0.662 |
| comYH | Streptococcus mutans UA140 |
66.139 |
99.685 |
0.659 |