Detailed information NTG0144671

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: YH61_RS05315
• Genome accession: NZ_CP011330
• Coordinates: 1142968..1144407 (+)
• Length: 479 a.a.
• NCBI ID: WP_000748996.1
• Uniprot ID: Q9ZJ97
• Organism: Helicobacter pylori J99
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1137968..1149407

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
YH61_RS05295 (YH61_05290)	glmS	1138601..1140394 (-)	1794	WP_000334347.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
YH61_RS05300 (YH61_05295)	-	1140395..1140634 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
YH61_RS05305 (YH61_05300)	-	1140679..1141221 (-)	543	WP_000923012.1	hypothetical protein	-
YH61_RS05310 (YH61_05305)	dnaA	1141374..1142747 (+)	1374	WP_000380659.1	chromosomal replication initiator protein DnaA	-
YH61_RS05315 (YH61_05310)	comH	1142968..1144407 (+)	1440	WP_000748996.1	hypothetical protein	Machinery gene
YH61_RS05325 (YH61_05320)	-	1144587..1145339 (+)	753	WP_000767522.1	exodeoxyribonuclease III	-
YH61_RS05330 (YH61_05325)	-	1145336..1145971 (-)	636	WP_000668069.1	outer membrane protein	-
YH61_RS05335 (YH61_05330)	-	1145975..1146322 (-)	348	WP_000837074.1	hypothetical protein	-
YH61_RS05340 (YH61_05335)	recG	1146399..1148270 (+)	1872	WP_046656380.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54595.49 Da
• Isoelectric Point: 7.1208

>NTDB_id=144671 YH61_RS05315 WP_000748996.1 1142968..1144407(+) (comH) [Helicobacter pylori J99]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVSPTNEVKTPTNDANPPLKHSSQDQENNLFVAPPTEKTLPNNTSSADASENNESNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDKDKEITTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=144671 YH61_RS05315 WP_000748996.1 1142968..1144407(+) (comH) [Helicobacter pylori J99]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
GATTAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACTCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCCACTAACGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAGCATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAGTGCTGATGCGA
GTGAAAACAATGAAAGCAACGAAAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATCAAAGAATTCGCA
TGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATAAAGACAAAGA
GATTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTCCAAGCCAGA
AGCTCTACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACCAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACGCAATTAGTGAAAGCCATATATGAACGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGTAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGCGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

3D structure

• AlphaFold DB: Q9ZJ97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.319	100	0.933