Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   AWB63_RS06680 Genome accession   NZ_CP014144
Coordinates   1409890..1411758 (+) Length   622 a.a.
NCBI ID   WP_038676470.1    Uniprot ID   -
Organism   Streptococcus salivarius strain JF     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1404890..1416758
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AWB63_RS06670 (AWB63_06670) gshAB 1405081..1407345 (-) 2265 WP_038676473.1 bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB -
  AWB63_RS06675 (AWB63_06675) - 1408155..1409900 (+) 1746 WP_038676472.1 ABC transporter ATP-binding protein -
  AWB63_RS06680 (AWB63_06680) rcrQ 1409890..1411758 (+) 1869 WP_038676470.1 ABC transporter ATP-binding protein Regulator
  AWB63_RS06685 (AWB63_06685) - 1411852..1413375 (-) 1524 WP_038676468.1 ATP-binding cassette domain-containing protein -
  AWB63_RS06690 (AWB63_06690) - 1413814..1414902 (+) 1089 WP_038676466.1 hypothetical protein -

Sequence

Protein


Download         Length: 622 a.a.        Molecular weight: 68733.08 Da        Isoelectric Point: 4.9838

>NTDB_id=144422 AWB63_RS06680 WP_038676470.1 1409890..1411758(+) (rcrQ) [Streptococcus salivarius strain JF]
MQNKKKANWGSLARLLRFLWQDYKLSLSIAFVLIVVASLATVNLTASIQSLVDVYVQPMLKSGSHDFGPLLHFLTSVAVF
CLIGVIANYVSSLLMATISQDSLRSLRNQLFARMQKLPVRYFDTHQHGDIMSIYTNDIDALRQAVEQSIPQLLQTAITLI
GVTVTMLTVSPLLFIVVLVMVGIMFMVIKNVSAKSGRYFGEQQKNLGIENGFIEEMMSGQKVVKAFVHEEESMADFDKIN
EQLFESSYLANRYANVLMPILGNLGNVSFVLTALVGGLFALNGVGGLTIGGLMAFLQLNRSFNGPITQVSQQLNFVLMAL
AGADRIFDLLDEPEEVDQGKVTLVNYELVDGQMVVTDKKTNLWAWKHPRPNGDYELVELVGNVVFQDVDFSYDGKKQILH
DVNLYADKGQKVAFVGATGAGKTTITNLINRFYDIQSGVITYDGIDVKLIEKDSLRRSLGIVLQDTHLFTGTIADNIAYG
RADATREEILEAARIANVDSFVQHLDNGYDTVLTDDGAGLSNGQRQLIAIARAALANAPVLILDEATSSIDSRTEKMVQE
GMDRLMEGRTVFVIAHRLSTIVNSDVIMVMDHGRIIERGDHDSLMEQGGTYYRLYTGGLEID

Nucleotide


Download         Length: 1869 bp        

>NTDB_id=144422 AWB63_RS06680 WP_038676470.1 1409890..1411758(+) (rcrQ) [Streptococcus salivarius strain JF]
ATGCAGAATAAGAAAAAAGCTAATTGGGGCTCTCTAGCACGTCTTCTACGCTTTTTGTGGCAAGACTACAAACTTTCGCT
TTCTATCGCCTTTGTCCTTATTGTGGTTGCTTCCTTGGCAACGGTCAATTTGACGGCTTCTATTCAGTCCTTGGTTGACG
TTTACGTTCAACCCATGCTCAAATCTGGTAGCCATGACTTTGGTCCGCTTTTACATTTCTTGACTTCAGTGGCTGTCTTC
TGTCTTATCGGTGTGATTGCCAACTATGTGTCATCACTCCTCATGGCGACGATTTCGCAAGATTCTCTACGTTCCCTTCG
TAATCAGCTCTTTGCTCGTATGCAAAAGCTTCCTGTTCGCTACTTTGACACTCACCAACACGGTGACATCATGTCTATCT
ACACCAACGACATCGATGCTCTCCGTCAGGCTGTTGAGCAATCCATTCCACAGTTGCTACAAACGGCTATTACCCTTATC
GGGGTAACAGTGACAATGCTTACGGTTAGTCCTCTCCTCTTTATCGTGGTCCTAGTCATGGTAGGTATCATGTTTATGGT
CATCAAAAATGTATCAGCCAAATCAGGCCGTTACTTCGGTGAACAACAAAAGAATTTGGGGATTGAGAATGGTTTCATCG
AGGAAATGATGTCAGGTCAAAAAGTGGTCAAGGCCTTTGTTCACGAAGAAGAAAGCATGGCTGATTTTGACAAGATTAAC
GAGCAACTCTTTGAATCTTCTTACTTGGCCAACCGCTATGCCAATGTTCTCATGCCAATTCTTGGGAACTTAGGAAATGT
TTCCTTTGTTTTGACCGCCTTGGTTGGTGGACTCTTTGCCCTTAATGGTGTCGGTGGTTTGACTATCGGTGGTCTCATGG
CCTTCCTACAATTGAACCGTTCCTTCAACGGACCTATTACTCAGGTCTCTCAACAACTGAACTTTGTTCTTATGGCACTT
GCTGGTGCTGACCGTATCTTTGACCTCTTGGATGAGCCAGAAGAAGTAGACCAAGGTAAGGTCACTTTGGTCAACTACGA
ATTGGTAGATGGTCAGATGGTTGTGACAGACAAGAAAACCAATCTTTGGGCTTGGAAACACCCACGTCCAAATGGCGACT
ACGAATTGGTCGAGTTGGTCGGAAATGTGGTCTTCCAAGACGTTGATTTCTCTTACGATGGTAAGAAACAAATCCTTCAT
GACGTTAATCTCTATGCAGACAAGGGGCAAAAGGTAGCCTTTGTGGGTGCGACAGGTGCTGGTAAGACGACGATTACCAA
CTTGATTAACCGTTTCTACGATATCCAATCTGGTGTGATTACTTATGATGGTATTGATGTCAAGCTGATTGAGAAAGATT
CTCTTCGTCGCTCACTTGGTATCGTGCTTCAAGATACCCATCTCTTCACGGGAACTATCGCTGATAATATTGCCTATGGT
CGTGCCGATGCGACACGTGAGGAAATTCTTGAAGCTGCCCGTATTGCTAACGTGGATTCCTTTGTACAACACTTGGATAA
TGGGTATGACACTGTTCTTACAGATGACGGCGCAGGCTTGTCCAATGGGCAACGTCAGCTTATCGCCATTGCGCGTGCTG
CCCTTGCCAATGCACCGGTTCTTATCCTTGACGAGGCGACATCCTCTATTGACTCTCGTACCGAAAAAATGGTGCAAGAG
GGGATGGACCGACTTATGGAAGGACGTACGGTTTTCGTTATTGCCCACCGTCTTTCAACCATTGTCAACTCTGACGTTAT
CATGGTTATGGACCACGGACGAATCATTGAACGTGGTGACCACGACAGCCTTATGGAACAAGGTGGTACTTACTACCGAC
TTTATACCGGTGGTCTGGAAATTGATTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-305)

ABC transporter (ABC_tran)

(399-548)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

36.911

98.875

0.365