Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   AWB63_RS05810 Genome accession   NZ_CP014144
Coordinates   1211062..1212810 (-) Length   582 a.a.
NCBI ID   WP_038676182.1    Uniprot ID   -
Organism   Streptococcus salivarius strain JF     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1206062..1217810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AWB63_RS05785 (AWB63_05785) dltD 1206431..1207699 (-) 1269 WP_038676178.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -
  AWB63_RS05790 (AWB63_05790) dltC 1207692..1207931 (-) 240 WP_002891149.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  AWB63_RS05795 (AWB63_05795) dltB 1207949..1209196 (-) 1248 WP_022496705.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  AWB63_RS05800 (AWB63_05800) dltA 1209193..1210743 (-) 1551 WP_038676180.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -
  AWB63_RS05805 (AWB63_05805) - 1210752..1210883 (-) 132 WP_002885174.1 teichoic acid D-Ala incorporation-associated protein DltX -
  AWB63_RS05810 (AWB63_05810) rcrQ 1211062..1212810 (-) 1749 WP_038676182.1 ABC transporter ATP-binding protein Regulator
  AWB63_RS05815 (AWB63_05815) - 1212800..1214539 (-) 1740 WP_038676183.1 ABC transporter ATP-binding protein -
  AWB63_RS05820 (AWB63_05820) - 1214570..1215181 (-) 612 WP_022496709.1 lysozyme family protein -
  AWB63_RS05825 (AWB63_05825) - 1215183..1216160 (-) 978 WP_004182031.1 nucleoid-associated protein -
  AWB63_RS05830 (AWB63_05830) glyA 1216166..1217416 (-) 1251 WP_038676185.1 serine hydroxymethyltransferase -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65408.87 Da        Isoelectric Point: 7.0651

>NTDB_id=144417 AWB63_RS05810 WP_038676182.1 1211062..1212810(-) (rcrQ) [Streptococcus salivarius strain JF]
MKARNNKSTLKRLSRDILSQRYLFALATVGTIIQVALTVYLPILIGDAVDAVLKMNAVLLMSRLIWQMLVVILANSAIQW
LNPLIYNRLIYSYSESLRERVMMKIHAMPLSYLDRQGTGDMVSRVTTDSDQLNNGLLMVFNQFFVGLLTIFVIIITMARL
DWFMMLLVLVMTPLSMLVARFIAKKSYQLYRNQTKWRGMQTQLIEESLTQEALVQSLNAQDQMVRSFKDVNGKYADYSQG
AIFYSSAVNPATRFVNSLIYALIAGVGAYRIMSGGAFTVGQLTTFLNYVTQYTKPFNDISSVLSELQSALACADRLYMIL
DEEEITETGKAVLEEADVQGRFQFDHVQFGYLPNKPLIKDLSIDIPAASTVAIVGPTGAGKSTLINLLMRFYDLDKGNIL
LDGRPITDYTRESLRKQIGMVLQETWLEVGTIHDNIAYANPEASREEVIAAAKAANADFFIQQLPQGYDTYLNDAGQSLS
QGQRQLLTIARIFVNVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTIENADLILVMNNGDIVEHGTH
EQLMQAKGMYYRMQTAQKTQNS

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=144417 AWB63_RS05810 WP_038676182.1 1211062..1212810(-) (rcrQ) [Streptococcus salivarius strain JF]
ATGAAGGCTAGAAATAATAAATCAACGCTTAAACGTTTAAGTAGAGATATCTTAAGTCAGCGTTACCTCTTTGCCTTAGC
AACTGTTGGGACCATTATTCAAGTTGCCTTAACGGTTTACTTACCTATCTTAATTGGTGATGCAGTGGACGCTGTTCTTA
AGATGAACGCCGTTCTATTGATGTCACGTTTAATTTGGCAGATGCTTGTAGTTATCTTAGCTAATAGTGCAATCCAGTGG
CTTAACCCTTTGATTTATAATCGATTAATTTATTCATATAGCGAAAGTTTACGTGAACGAGTCATGATGAAAATTCATGC
TATGCCACTTAGTTATCTTGATCGTCAAGGAACTGGAGACATGGTTAGCCGTGTGACTACAGATAGCGATCAGTTAAACA
ACGGACTTCTCATGGTCTTTAACCAATTTTTCGTTGGGCTTTTGACTATCTTTGTCATAATCATTACCATGGCTCGCTTA
GACTGGTTCATGATGCTCTTAGTTCTAGTGATGACGCCTCTGTCAATGCTTGTGGCACGTTTTATCGCAAAGAAGAGCTA
TCAACTCTATCGCAATCAAACTAAATGGCGAGGCATGCAGACTCAGTTGATTGAGGAAAGTCTGACTCAAGAAGCTTTAG
TACAGAGTCTAAATGCTCAAGACCAGATGGTTAGGAGTTTTAAAGACGTCAATGGTAAGTATGCTGATTATTCACAGGGT
GCTATCTTTTATTCGTCAGCAGTTAACCCAGCTACACGTTTTGTCAATAGTCTGATCTATGCTCTCATTGCAGGTGTTGG
TGCTTATCGAATCATGTCGGGTGGCGCTTTTACAGTGGGACAATTGACTACCTTCCTAAATTATGTCACCCAGTATACCA
AACCTTTTAATGATATCTCATCTGTTCTATCTGAACTTCAAAGTGCTTTGGCCTGTGCTGATCGCCTTTATATGATATTG
GATGAAGAGGAAATAACAGAAACAGGTAAGGCGGTCTTGGAAGAAGCAGATGTGCAGGGACGTTTTCAATTTGACCATGT
CCAATTTGGCTATTTGCCTAATAAACCTCTTATCAAGGATTTGAGTATTGATATCCCTGCCGCAAGTACTGTTGCCATTG
TTGGTCCAACAGGAGCGGGGAAATCTACCTTGATTAACCTACTTATGCGTTTCTATGATTTGGACAAGGGGAACATTCTA
CTGGACGGGAGACCTATTACAGATTATACCCGTGAGAGTCTTCGGAAACAGATTGGGATGGTTTTGCAGGAAACTTGGCT
TGAGGTCGGCACTATTCATGATAATATTGCCTATGCTAATCCAGAAGCCAGTCGTGAAGAAGTCATAGCAGCGGCCAAGG
CTGCCAATGCAGATTTCTTTATTCAGCAGTTGCCTCAAGGTTATGACACCTACTTGAATGATGCGGGACAATCCCTTTCT
CAGGGACAACGTCAGCTTTTGACCATTGCTCGCATATTTGTCAATGTGCCTAAAATCTTAATCTTGGATGAAGCCACTTC
TAGTATCGATACCCGTACAGAGCTTCTCATTCAAGAGGCTTTTGCTAAATTAATGAAAGGTCGAACAAGTTTCATCATTG
CCCATCGATTATCTACCATCGAAAATGCGGACCTTATTTTGGTCATGAATAATGGGGATATCGTTGAACACGGAACCCAT
GAACAACTGATGCAAGCTAAGGGAATGTACTATCGTATGCAGACGGCCCAAAAGACACAAAATAGTTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.567

100

0.388

Multiple sequence alignment