Detailed information
Bioinformatically predicted
Overview
| Name | pilM | Type | Machinery gene |
| Locus tag | myaer_RS13140 | Genome accession | NZ_CP011304 |
| Coordinates | 2674511..2675626 (-) | Length | 371 a.a. |
| NCBI ID | WP_046662421.1 | Uniprot ID | A0A0F6U5B9 |
| Organism | Microcystis aeruginosa NIES-2549 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2669511..2680626
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| myaer_RS13110 (MYAER_2683) | - | 2669644..2669928 (-) | 285 | WP_046662417.1 | hypothetical protein | - |
| myaer_RS13115 (MYAER_2684) | - | 2669931..2670149 (+) | 219 | WP_046662418.1 | hypothetical protein | - |
| myaer_RS13125 (MYAER_2686) | - | 2670668..2672758 (-) | 2091 | WP_046663768.1 | secretin N-terminal domain-containing protein | - |
| myaer_RS13130 (MYAER_2687) | - | 2672943..2673734 (-) | 792 | WP_046662419.1 | hypothetical protein | - |
| myaer_RS13135 (MYAER_2688) | - | 2673731..2674501 (-) | 771 | WP_046662420.1 | PilN domain-containing protein | - |
| myaer_RS13140 (MYAER_2689) | pilM | 2674511..2675626 (-) | 1116 | WP_046662421.1 | type IV pilus assembly protein PilM | Machinery gene |
| myaer_RS13150 (MYAER_2690) | ilvC | 2676132..2677124 (+) | 993 | WP_046662422.1 | ketol-acid reductoisomerase | - |
| myaer_RS13155 (MYAER_2691) | - | 2677230..2678018 (-) | 789 | WP_046662423.1 | ECF transporter S component | - |
| myaer_RS13160 (MYAER_2692) | - | 2678165..2678509 (+) | 345 | WP_052734183.1 | transposase | - |
| myaer_RS13165 (MYAER_2693) | - | 2678713..2679759 (-) | 1047 | WP_046662424.1 | S66 peptidase family protein | - |
| myaer_RS13170 (MYAER_2695) | - | 2680009..2680476 (-) | 468 | WP_046662425.1 | CBS domain-containing protein | - |
Sequence
Protein
Download Length: 371 a.a. Molecular weight: 41346.32 Da Isoelectric Point: 4.3560
>NTDB_id=144352 myaer_RS13140 WP_046662421.1 2674511..2675626(-) (pilM) [Microcystis aeruginosa NIES-2549]
MVSFFKKLLTKKTQGVGLEITPERINVAQIAKQKQNYKLVKYCSSDIPEGIFEEGKIVDSAALAELIQEVLRENKITSKR
VATGVPMRESIIRIIAIPSELDEEELRDLVLNHEANLYLPYPREEVDIDYQKLGYFQDEDGIEKVQVLLVATRREITDAY
LETLQQAGLQVDVLEINSFALIRTIRDQLRQFSSNEATVIVDIEFDNTEIAIVVDGVPQFSRTVPIGTFQLQNALSRAMN
LPTSRSPEILLGMTIPTTAFDSLGTNTSVSRSFTTAGMAALMRVLGELTDELRRSINFYLNQSDELEIVQLLLAGPGGGL
AQLDEYFTQRLSITTMPIDPIASLNLDIDQEIPNTQRPGLGTVLGLGLREV
MVSFFKKLLTKKTQGVGLEITPERINVAQIAKQKQNYKLVKYCSSDIPEGIFEEGKIVDSAALAELIQEVLRENKITSKR
VATGVPMRESIIRIIAIPSELDEEELRDLVLNHEANLYLPYPREEVDIDYQKLGYFQDEDGIEKVQVLLVATRREITDAY
LETLQQAGLQVDVLEINSFALIRTIRDQLRQFSSNEATVIVDIEFDNTEIAIVVDGVPQFSRTVPIGTFQLQNALSRAMN
LPTSRSPEILLGMTIPTTAFDSLGTNTSVSRSFTTAGMAALMRVLGELTDELRRSINFYLNQSDELEIVQLLLAGPGGGL
AQLDEYFTQRLSITTMPIDPIASLNLDIDQEIPNTQRPGLGTVLGLGLREV
Nucleotide
Download Length: 1116 bp
>NTDB_id=144352 myaer_RS13140 WP_046662421.1 2674511..2675626(-) (pilM) [Microcystis aeruginosa NIES-2549]
ATGGTAAGTTTTTTTAAAAAGCTATTGACAAAAAAAACTCAAGGTGTTGGGTTAGAGATTACCCCAGAGCGCATTAACGT
GGCTCAGATCGCCAAACAGAAACAAAATTATAAATTAGTTAAATATTGTTCGTCGGATATCCCAGAAGGCATCTTTGAGG
AGGGAAAAATCGTCGATTCCGCCGCTTTAGCGGAATTAATCCAAGAAGTCCTCAGGGAAAATAAAATTACTAGCAAACGA
GTCGCTACTGGTGTCCCCATGCGCGAGTCAATTATCCGGATTATCGCCATTCCCTCGGAATTGGACGAGGAGGAATTACG
CGATCTGGTCTTAAATCATGAAGCTAATTTATACCTTCCCTATCCGCGTGAGGAAGTGGATATCGACTACCAAAAACTGG
GCTACTTTCAGGACGAGGACGGGATCGAAAAGGTGCAGGTTTTGCTGGTAGCTACTCGTCGGGAGATCACCGATGCCTAT
CTGGAAACCCTGCAACAGGCAGGATTACAGGTAGATGTGCTAGAAATTAATAGTTTTGCCCTAATTCGGACGATTCGCGA
TCAGTTGCGACAGTTTAGTTCCAATGAAGCTACCGTTATTGTCGATATAGAATTTGATAACACGGAAATCGCCATCGTGG
TGGACGGCGTTCCCCAATTTTCCCGCACTGTCCCCATCGGCACTTTCCAGCTACAAAATGCCCTTTCCAGGGCGATGAAT
TTGCCCACCTCCCGCAGTCCTGAGATTCTTTTGGGGATGACAATCCCGACTACTGCCTTTGATAGTCTTGGCACCAATAC
CAGTGTTTCCAGAAGCTTTACTACCGCCGGGATGGCGGCACTGATGCGGGTTTTGGGGGAATTAACCGATGAATTGCGGC
GATCGATTAATTTCTATCTTAACCAAAGTGATGAACTGGAAATTGTCCAGTTACTTTTAGCAGGTCCCGGGGGCGGTTTA
GCACAACTAGATGAATATTTTACTCAACGTCTTAGCATCACTACTATGCCAATCGATCCGATCGCATCACTGAACCTAGA
TATCGATCAAGAGATTCCTAATACCCAAAGACCTGGTTTAGGAACAGTTCTCGGTTTAGGATTGCGGGAGGTATAG
ATGGTAAGTTTTTTTAAAAAGCTATTGACAAAAAAAACTCAAGGTGTTGGGTTAGAGATTACCCCAGAGCGCATTAACGT
GGCTCAGATCGCCAAACAGAAACAAAATTATAAATTAGTTAAATATTGTTCGTCGGATATCCCAGAAGGCATCTTTGAGG
AGGGAAAAATCGTCGATTCCGCCGCTTTAGCGGAATTAATCCAAGAAGTCCTCAGGGAAAATAAAATTACTAGCAAACGA
GTCGCTACTGGTGTCCCCATGCGCGAGTCAATTATCCGGATTATCGCCATTCCCTCGGAATTGGACGAGGAGGAATTACG
CGATCTGGTCTTAAATCATGAAGCTAATTTATACCTTCCCTATCCGCGTGAGGAAGTGGATATCGACTACCAAAAACTGG
GCTACTTTCAGGACGAGGACGGGATCGAAAAGGTGCAGGTTTTGCTGGTAGCTACTCGTCGGGAGATCACCGATGCCTAT
CTGGAAACCCTGCAACAGGCAGGATTACAGGTAGATGTGCTAGAAATTAATAGTTTTGCCCTAATTCGGACGATTCGCGA
TCAGTTGCGACAGTTTAGTTCCAATGAAGCTACCGTTATTGTCGATATAGAATTTGATAACACGGAAATCGCCATCGTGG
TGGACGGCGTTCCCCAATTTTCCCGCACTGTCCCCATCGGCACTTTCCAGCTACAAAATGCCCTTTCCAGGGCGATGAAT
TTGCCCACCTCCCGCAGTCCTGAGATTCTTTTGGGGATGACAATCCCGACTACTGCCTTTGATAGTCTTGGCACCAATAC
CAGTGTTTCCAGAAGCTTTACTACCGCCGGGATGGCGGCACTGATGCGGGTTTTGGGGGAATTAACCGATGAATTGCGGC
GATCGATTAATTTCTATCTTAACCAAAGTGATGAACTGGAAATTGTCCAGTTACTTTTAGCAGGTCCCGGGGGCGGTTTA
GCACAACTAGATGAATATTTTACTCAACGTCTTAGCATCACTACTATGCCAATCGATCCGATCGCATCACTGAACCTAGA
TATCGATCAAGAGATTCCTAATACCCAAAGACCTGGTTTAGGAACAGTTCTCGGTTTAGGATTGCGGGAGGTATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilM | Synechocystis sp. PCC 6803 |
73.784 |
99.73 |
0.736 |