Detailed information NTG0143941

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AL533_RS08705
• Genome accession: NZ_CP014019
• Coordinates: 1787679..1788494 (-)
• Length: 271 a.a.
• NCBI ID: WP_016804843.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain FDAARGOS_129
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1782679..1793494

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL533_RS08675 (AL533_08675)	-	1782989..1783429 (-)	441	WP_002050033.1	SRPBCC family protein	-
AL533_RS08680 (AL533_08680)	tadA	1783499..1784002 (-)	504	WP_031944625.1	tRNA adenosine(34) deaminase TadA	-
AL533_RS08685 (AL533_08685)	-	1784009..1785133 (-)	1125	WP_006580787.1	enoyl-CoA hydratase/isomerase family protein	-
AL533_RS08690 (AL533_08690)	ung	1785130..1785843 (-)	714	WP_002049829.1	uracil-DNA glycosylase	-
AL533_RS08695 (AL533_08695)	-	1785894..1786490 (-)	597	WP_016804842.1	6-pyruvoyl trahydropterin synthase family protein	-
AL533_RS08700 (AL533_08700)	gspK	1786720..1787679 (-)	960	WP_004709110.1	type II secretion system minor pseudopilin GspK	-
AL533_RS08705 (AL533_08705)	xcpW	1787679..1788494 (-)	816	WP_016804843.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AL533_RS08710 (AL533_08710)	gspI	1788494..1788872 (-)	379	Protein_1705	type II secretion system minor pseudopilin GspI	-
AL533_RS08715 (AL533_08715)	-	1788862..1789413 (-)	552	WP_016804845.1	type II secretion system protein	-
AL533_RS08720 (AL533_08720)	-	1789423..1790031 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AL533_RS08725 (AL533_08725)	-	1790069..1790842 (-)	774	WP_004709116.1	TatD family hydrolase	-
AL533_RS08730 (AL533_08730)	-	1790860..1791201 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AL533_RS08735 (AL533_08735)	-	1791213..1792193 (-)	981	WP_016804846.1	DNA polymerase III subunit delta'	-
AL533_RS08740 (AL533_08740)	kdsB	1792205..1792966 (-)	762	WP_104918897.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30739.09 Da
• Isoelectric Point: 9.9903

>NTDB_id=143941 AL533_RS08705 WP_016804843.1 1787679..1788494(-) (xcpW) [Acinetobacter nosocomialis strain FDAARGOS_129]
MIKNKNFRIQSIASHLRAQSGVIPTDYSGHSSSSYAQTKLRFREPHTRNMVSRLAARSSNARLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDSLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKSNELKKLPKG
IKIQLTVAGVSYEWIYSLNQSNLSLSPHGGS

Nucleotide

• Length: 816 bp

>NTDB_id=143941 AL533_RS08705 WP_016804843.1 1787679..1788494(-) (xcpW) [Acinetobacter nosocomialis strain FDAARGOS_129]
ATGATAAAAAATAAGAATTTTCGAATTCAAAGCATTGCTTCTCATCTTAGAGCTCAGTCGGGTGTTATTCCGACTGACTA
CTCTGGGCATAGCTCTTCGTCTTACGCTCAGACAAAGCTTCGCTTTAGAGAGCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAATGCTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAATTGTTAGTTGCGATTGCTATC
TTTGCGGTCTTATCTTTATTGGGGTGGAAAATTTTCGATTACTTGCTTAAAGTTCGTGACCGTAATGCTGAACATGAAGT
ACATTTGTTTGAGTTACAAGATGCTTATCAACAAATTCTTCGTGATAGTCTGCAAATTATTCCTTTATCTGCAAATCAAG
GTGGTCAACTTCATCCAGCTTTAGAAATTGATAATCAAATTCTGCGTTTTAGCAAAGCAGGTGTAACGGATCCTTTAAAA
CAAGGTTTATCACCGTTTGAACGAATTGAATATCGTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAA
TTTGAATACTTCGAATAATGAGCAACCTTTATCGAGTACCTTGCTAAGTCAGGTTGACCAATATCAGATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAGTGGCCTGAGGTTAATATTGATCCAACAAAGTCTAACGAATTGAAAAAATTACCGAAAGGA
ATAAAAATTCAACTTACTGTAGCAGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAAGTAATTTATCGCTTTCCCC
ACATGGTGGCTCATAA

Domains

Predicted by InterProScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	93.805	83.395	0.782