Detailed information NTG0143260

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: AVT04_RS07805
• Genome accession: NZ_CP013939
• Coordinates: 1457501..1459897 (+)
• Length: 798 a.a.
• NCBI ID: WP_011227404.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S9
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1452501..1464897

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVT04_RS07775 (AVT04_07775)	-	1452594..1452971 (-)	378	WP_011226300.1	GntR family transcriptional regulator	-
AVT04_RS07780 (AVT04_07780)	-	1453154..1453948 (+)	795	WP_059257398.1	HAD hydrolase family protein	-
AVT04_RS07785 (AVT04_07785)	-	1453941..1454756 (+)	816	WP_011227405.1	Cof-type HAD-IIB family hydrolase	-
AVT04_RS07790 (AVT04_07790)	ftsY	1454770..1456161 (+)	1392	WP_011226297.1	signal recognition particle-docking protein FtsY	-
AVT04_RS07795 (AVT04_07795)	gmk	1456394..1457023 (+)	630	WP_011226296.1	guanylate kinase	-
AVT04_RS07800 (AVT04_07800)	rpoZ	1457045..1457359 (+)	315	WP_002951415.1	DNA-directed RNA polymerase subunit omega	-
AVT04_RS07805 (AVT04_07805)	priA	1457501..1459897 (+)	2397	WP_011227404.1	primosomal protein N'	Machinery gene
AVT04_RS07810 (AVT04_07810)	fmt	1459915..1460850 (+)	936	WP_002951411.1	methionyl-tRNA formyltransferase	-
AVT04_RS07815 (AVT04_07815)	rsmB	1460840..1462162 (+)	1323	WP_014608533.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
AVT04_RS07820 (AVT04_07820)	-	1462206..1462943 (+)	738	WP_002946881.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-
AVT04_RS07825 (AVT04_07825)	stkP/pknB	1462943..1464814 (+)	1872	WP_011226292.1	Stk1 family PASTA domain-containing Ser/Thr kinase	Regulator

Sequence

Protein

• Length: 798 a.a.
• Molecular weight: 90771.86 Da
• Isoelectric Point: 6.6579

>NTDB_id=143260 AVT04_RS07805 WP_011227404.1 1457501..1459897(+) (priA) [Streptococcus thermophilus strain S9]
MVLVAQIIVDVPLMQTDRPYSYLVPESMQGQITIGMRIHVPFGKGNRLLQGFVIGFGEQENVRNLPDLKPIAELLDYEPV
LNQDQLDLADQMRHTVFSYKISILKSMLPGLLNSQYDKVIMATDKLSEEERDVFLQGRDHILFSQLSKEQGQAIPRLVGS
GRVTVDYIARDKQNIKTEKHYSVQRGILETLDISQRAKKRLELRDFLLEKNEPGKLVDLHKLFSRDVVKFFIEAGALDIT
EVEVNRADNYFEKVEKTDFLELNAQQAHAVEVMTGQIGHGGKPFLLEGVTGSGKTEVYLHLIERTLAMGKTAIVLVPEIS
LTPQMTNRFISRFGDLVAIMHSGLSDGEKFDEWRKVRSGQAKVVVGARSAIFAPLDNIGAIIIDEEHEATYKQESNPRYH
ARDVALLRSKSHGAILVLGSATPSIESRARAQKGVYHFFELTERANPSAKIPQVEVVDFKDFVGRQEASDFTPPLLEKIR
ERLARKEQVVLLLNRRGYSSFVMCRDCGYVDDCPNCDISLTLHMDTKTMNCHYCDFQKAIPNVCPNCQSRQIRYYGTGTQ
KAYDQLTELFPEARVIRMDVDTTRKKGAHEKLLETFGSGKADILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSAE
RTFQLLTQVAGRAGRADKEGEVIIQTYNPSHYAIRFAQQQDYEGFYAYEMGIRRQLAYPPYFYTVGITLSHKDEEFVVRK
SYDVMACLREHLSDKVTFLGPTPKPIARTHNLYHYQIIIKYRFEDSLEETLNRILDMTQEPENKDLRLIIDHEPQNFT

Nucleotide

• Length: 2397 bp

>NTDB_id=143260 AVT04_RS07805 WP_011227404.1 1457501..1459897(+) (priA) [Streptococcus thermophilus strain S9]
ATGGTTTTAGTTGCACAAATAATTGTAGATGTTCCTCTAATGCAGACGGACAGGCCTTATAGTTACCTTGTACCAGAATC
CATGCAGGGGCAAATTACCATCGGTATGAGGATTCATGTGCCTTTTGGTAAAGGAAATCGTCTCTTGCAAGGGTTTGTTA
TTGGCTTTGGAGAGCAAGAAAATGTAAGAAATCTGCCAGACTTGAAGCCAATTGCGGAACTTTTGGATTATGAACCAGTC
CTTAATCAGGATCAGCTGGATTTGGCTGACCAAATGCGACACACGGTTTTTTCCTATAAGATTTCCATCTTGAAGTCTAT
GCTTCCGGGTCTCCTTAATTCACAGTATGACAAAGTTATCATGGCAACTGATAAACTGAGCGAAGAGGAGAGGGACGTTT
TTCTTCAGGGGCGAGACCATATTCTCTTCTCTCAATTGTCGAAAGAACAAGGTCAAGCCATTCCGCGTTTGGTGGGATCT
GGTCGCGTAACGGTTGATTACATTGCTAGGGATAAACAAAATATAAAAACGGAGAAACATTATAGTGTTCAAAGAGGCAT
TTTAGAGACTTTGGATATTTCGCAACGAGCCAAGAAGCGGCTGGAGTTGCGGGACTTCTTGTTAGAAAAGAATGAGCCTG
GAAAGTTAGTAGACCTGCATAAACTTTTTTCTCGAGATGTGGTGAAGTTTTTCATTGAGGCTGGAGCTCTAGACATCACT
GAAGTTGAGGTCAATCGTGCTGATAACTACTTTGAAAAGGTAGAGAAGACGGATTTTCTAGAGCTTAATGCTCAGCAAGC
ACATGCTGTTGAAGTAATGACAGGTCAGATTGGTCATGGTGGGAAGCCGTTCTTGTTGGAAGGAGTGACGGGGTCAGGTA
AGACTGAGGTTTACCTGCATCTTATTGAGAGAACCTTGGCTATGGGAAAAACTGCCATTGTCTTGGTTCCAGAAATTTCT
CTGACGCCACAAATGACCAATCGTTTCATCTCCCGTTTTGGTGACTTGGTAGCAATCATGCATTCAGGCTTGTCAGATGG
TGAAAAATTTGACGAGTGGCGTAAGGTTAGGTCTGGTCAAGCAAAGGTCGTTGTAGGAGCACGTTCTGCTATCTTTGCTC
CCTTGGACAATATTGGAGCAATCATTATCGATGAGGAGCACGAGGCGACCTATAAGCAGGAATCCAATCCTCGCTATCAT
GCTAGAGATGTGGCCTTGCTTAGGTCCAAAAGCCATGGCGCTATTCTTGTACTTGGTTCAGCCACGCCTTCTATTGAGTC
GCGAGCGAGGGCTCAGAAAGGGGTCTACCATTTTTTTGAATTGACGGAGAGGGCCAATCCTAGTGCTAAAATTCCGCAGG
TTGAAGTGGTGGACTTTAAGGACTTTGTCGGTAGACAAGAGGCGAGTGATTTTACGCCACCTCTCTTGGAGAAAATCCGA
GAGCGATTGGCACGTAAGGAACAAGTCGTTTTGTTGTTGAATCGTCGTGGGTATTCTTCATTTGTCATGTGTCGTGACTG
TGGCTATGTGGATGACTGTCCGAACTGTGATATTTCACTGACTTTGCATATGGATACCAAGACCATGAATTGTCACTACT
GTGATTTTCAAAAAGCTATTCCTAATGTCTGTCCTAATTGCCAGAGTCGTCAGATTCGCTATTATGGGACTGGGACACAG
AAGGCTTATGATCAATTGACGGAACTTTTTCCAGAAGCCAGAGTGATTCGTATGGATGTTGATACTACACGTAAAAAAGG
CGCTCACGAGAAACTTTTAGAGACTTTTGGGAGTGGCAAGGCTGATATTCTGCTAGGCACTCAAATGATTGCCAAGGGTT
TGGATTTTCCCAATGTTACCTTGGTAGGGGTCTTAAATGCGGATACGTCGCTAAATTTACCAGATTTTCGTTCGGCTGAG
CGCACTTTCCAGCTGTTGACTCAGGTGGCTGGTCGTGCTGGTCGTGCGGACAAGGAAGGGGAGGTTATTATTCAGACCTA
TAACCCTAGTCATTATGCCATTCGTTTTGCTCAGCAACAGGATTATGAGGGATTCTATGCCTATGAGATGGGGATTCGCC
GTCAGTTGGCCTACCCGCCATATTTTTATACGGTAGGGATCACTCTTTCCCACAAGGATGAAGAGTTTGTAGTCCGTAAG
AGCTATGATGTCATGGCTTGTTTAAGAGAACATTTGTCGGACAAGGTGACTTTCTTGGGACCAACACCAAAACCTATTGC
CCGAACACATAACCTTTATCATTATCAGATTATTATCAAATATCGTTTTGAGGATAGCTTGGAAGAGACGCTTAATAGGA
TCCTTGATATGACTCAGGAACCTGAAAATAAGGATCTACGTTTGATTATCGATCATGAGCCTCAGAATTTTACCTAA

Domains

Predicted by InterProScan.

• Primosomal protein N C-terminal domain (PriA_C) (700-794)

• Helicase conserved C-terminal domain (Helicase_C) (567-656)

• Type III restriction enzyme, res subunit (ResIII) (260-424)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (6-109)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (513-538)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	47.826	100	0.482