Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   APQ13_RS02905 Genome accession   NZ_CP013237
Coordinates   598570..600315 (+) Length   581 a.a.
NCBI ID   WP_002270002.1    Uniprot ID   -
Organism   Streptococcus mutans strain NG8 isolate Dental Plaque     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 593570..605315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  APQ13_RS02885 (APQ13_02880) glyA 593978..595240 (+) 1263 WP_002282524.1 serine hydroxymethyltransferase -
  APQ13_RS02890 (APQ13_02885) - 595237..596214 (+) 978 WP_002264268.1 nucleoid-associated protein -
  APQ13_RS02895 (APQ13_02890) - 596216..596830 (+) 615 WP_002286819.1 lysozyme family protein -
  APQ13_RS02900 (APQ13_02895) - 596840..598573 (+) 1734 WP_049474532.1 ABC transporter ATP-binding protein -
  APQ13_RS02905 (APQ13_02900) rcrQ 598570..600315 (+) 1746 WP_002270002.1 ABC transporter ATP-binding protein Regulator
  APQ13_RS02910 (APQ13_02905) - 600446..602161 (-) 1716 WP_002264266.1 phospho-sugar mutase -
  APQ13_RS02915 (APQ13_02910) - 602256..602828 (-) 573 WP_002262264.1 ECF transporter S component -
  APQ13_RS02920 (APQ13_02915) coaC 602903..603442 (-) 540 WP_002289591.1 phosphopantothenoylcysteine decarboxylase -
  APQ13_RS02925 (APQ13_02920) - 603435..604121 (-) 687 WP_002273952.1 phosphopantothenate--cysteine ligase -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65283.99 Da        Isoelectric Point: 9.5819

>NTDB_id=139655 APQ13_RS02905 WP_002270002.1 598570..600315(+) (rcrQ) [Streptococcus mutans strain NG8 isolate Dental Plaque]
MKARNNKNTLKRLNADFLKQRILVFLALLGTLIQVSLTVYLPVLIGRAVDAVLAKNVQKILPTILISMILVVAFNTIIQW
INPLIYNRLVFTYSQKLRQNIIEKLYRLPLSYLDKHSSGDLVSRITTDVEQLSNGLLMVFNQFFVGILTILLTIITMAKL
DFFMMVLVLALTPLSLFVARFIAQKSYHLYQRQTRARGAFTQHIEESLRQESLIQSFNAQDQFIHTFDHLNSKYAKYSQG
AIFYSSTVNPATRFINALIYALLAGIGALRIMNGNFTVGQLTTFLNYVTQYTKPFNDISAVLSELQSALACAERLYMILD
EKDAKDDGKKELVSESVKGAIAFDKISFGYDEKQTLIKNLSVNIPQGSKVAIVGPTGAGKSTLINLLMRFYDLREGQILL
DGQAITDYSKASYRQQIGMVLQETWLKTATVLENIAFGYPEASREQVIAAAKAANADFFIKQLPQGYDTFLADAGESLSQ
GQRQLLTIARIFVHIPKILILDEATSSIDTRTEILVQEAFEKLMKGRTSFIIAHRLSTIQSADLILVMVDGNIVEQGNHK
DLMQKKGVYYQMQTAQDSLES

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=139655 APQ13_RS02905 WP_002270002.1 598570..600315(+) (rcrQ) [Streptococcus mutans strain NG8 isolate Dental Plaque]
ATGAAAGCTAGAAATAATAAAAATACCTTAAAGCGCTTGAATGCTGACTTTCTTAAGCAGAGAATTTTGGTTTTTCTTGC
CTTATTGGGTACTTTGATTCAGGTCAGCCTAACGGTTTATCTCCCAGTTCTAATTGGGCGAGCAGTTGATGCTGTTCTTG
CTAAAAATGTCCAGAAAATCTTACCGACAATCTTGATTAGCATGATTCTTGTTGTTGCCTTTAATACCATTATCCAATGG
ATCAATCCCTTGATTTACAATCGTTTGGTTTTCACTTATAGCCAGAAGCTTCGGCAGAATATCATTGAAAAACTTTATCG
CCTCCCTTTATCTTATTTGGATAAGCATTCTTCAGGTGATTTAGTCAGTCGTATAACAACGGATGTTGAACAATTATCCA
ACGGACTTTTAATGGTTTTTAATCAGTTTTTCGTAGGTATTTTAACTATTTTGTTAACCATCATAACAATGGCGAAGTTA
GACTTTTTTATGATGGTTTTGGTACTGGCCTTAACACCACTTTCCTTATTTGTTGCTCGTTTTATTGCTCAAAAGAGTTA
TCATCTTTATCAAAGACAAACCAGAGCCAGAGGGGCGTTTACTCAACATATTGAAGAGAGTCTTCGTCAGGAAAGTTTGA
TTCAAAGTTTCAATGCTCAAGATCAATTTATTCACACTTTTGATCATCTAAATAGCAAATATGCTAAGTATTCACAAGGG
GCTATTTTCTATTCATCCACAGTCAACCCTGCGACTCGTTTTATCAATGCCTTAATTTATGCGCTCTTAGCTGGTATCGG
AGCATTACGCATTATGAATGGGAATTTTACTGTGGGGCAATTGACCACTTTCTTGAATTATGTCACTCAATATACCAAAC
CCTTTAATGACATTTCAGCCGTTCTATCTGAATTACAAAGTGCTTTAGCATGTGCAGAACGTCTCTATATGATTCTTGAT
GAAAAGGATGCCAAAGATGATGGCAAGAAAGAATTAGTCAGTGAATCTGTTAAAGGTGCTATTGCCTTTGATAAGATTAG
TTTTGGTTATGATGAGAAACAAACTCTGATTAAGAATTTGTCTGTCAATATTCCACAAGGTTCCAAGGTGGCTATCGTTG
GTCCTACAGGGGCTGGAAAATCAACTCTCATTAATTTGCTGATGCGATTTTATGATTTGCGAGAAGGGCAAATACTGCTA
GATGGGCAAGCAATCACTGATTATAGTAAAGCTTCTTATCGTCAGCAGATTGGTATGGTCTTACAAGAAACTTGGCTGAA
AACGGCTACTGTTTTGGAAAATATTGCCTTTGGTTATCCTGAAGCTAGCCGCGAGCAAGTGATTGCAGCGGCAAAAGCAG
CTAATGCCGACTTTTTTATAAAACAACTTCCTCAAGGTTACGATACTTTTTTGGCCGATGCAGGAGAATCCCTATCACAA
GGGCAAAGGCAATTGTTAACGATAGCACGAATTTTTGTTCATATTCCTAAAATATTAATCTTGGATGAAGCAACTTCCTC
CATTGATACACGAACAGAAATCTTGGTCCAAGAAGCATTTGAAAAGCTTATGAAAGGACGGACCAGCTTTATTATTGCAC
ATAGATTGTCAACTATTCAAAGCGCAGACCTTATCTTAGTTATGGTAGATGGCAATATTGTTGAACAAGGAAATCATAAA
GACTTGATGCAGAAAAAAGGTGTCTATTATCAAATGCAGACAGCACAGGATAGCCTTGAAAGCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(358-506)

ABC transporter transmembrane region (ABC_membrane)

(24-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.737

100

0.391