Detailed information
Bioinformatically predicted
Overview
| Name | ctsG | Type | Machinery gene |
| Locus tag | RC33_RS06290 | Genome accession | NZ_CP010506 |
| Coordinates | 1203867..1204382 (-) | Length | 171 a.a. |
| NCBI ID | WP_052803035.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ677CC527 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1198867..1209382
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC33_RS06275 (RC33_06270) | - | 1198999..1200697 (-) | 1699 | Protein_1231 | flagellin A | - |
| RC33_RS06280 (RC33_06275) | - | 1200780..1202606 (-) | 1827 | WP_002934395.1 | motility associated factor glycosyltransferase family protein | - |
| RC33_RS06285 (RC33_06280) | - | 1202616..1203867 (-) | 1252 | Protein_1233 | DUF2920 family protein | - |
| RC33_RS06290 (RC33_06285) | ctsG | 1203867..1204382 (-) | 516 | WP_052803035.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| RC33_RS06295 (RC33_06290) | tsaD | 1204383..1205390 (-) | 1008 | WP_002934392.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| RC33_RS06300 (RC33_06295) | - | 1205387..1206781 (-) | 1395 | WP_002934391.1 | M99 family carboxypeptidase catalytic domain-containing protein | - |
| RC33_RS06305 (RC33_06300) | dxr | 1206783..1207853 (-) | 1071 | WP_002934390.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| RC33_RS06310 (RC33_06305) | cdsA | 1207850..1208575 (-) | 726 | WP_002934389.1 | phosphatidate cytidylyltransferase | - |
| RC33_RS06315 (RC33_06310) | - | 1208584..1208922 (-) | 339 | WP_002855905.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18733.60 Da Isoelectric Point: 6.4683
>NTDB_id=138708 RC33_RS06290 WP_052803035.1 1203867..1204382(-) (ctsG) [Campylobacter jejuni strain CJ677CC527]
MRKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGIENVDLSN
FNGVKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQNHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM
MRKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGIENVDLSN
FNGVKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQNHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM
Nucleotide
Download Length: 516 bp
>NTDB_id=138708 RC33_RS06290 WP_052803035.1 1203867..1204382(-) (ctsG) [Campylobacter jejuni strain CJ677CC527]
ATGAGAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTAGGAATTTTAGCTGCTATTGCTTTGCCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAATAATCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGACCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGATTGAAAATGTCGATCTTAGTAAT
TTTAACGGCGTAAAAGAAGTAAATTTTCGTGTAGGTGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAGGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAGGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAACCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGCAATAAAGCTTGCGTGATCTTAAGCAAGAATGAAAATTTTAAAAATCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA
ATGAGAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTAGGAATTTTAGCTGCTATTGCTTTGCCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAATAATCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGACCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGATTGAAAATGTCGATCTTAGTAAT
TTTAACGGCGTAAAAGAAGTAAATTTTCGTGTAGGTGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAGGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAGGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAACCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGCAATAAAGCTTGCGTGATCTTAAGCAAGAATGAAAATTTTAAAAATCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsG | Campylobacter jejuni subsp. jejuni 81-176 |
94.737 |
100 |
0.947 |