Detailed information NTG0137680

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ACT74_RS05600
• Genome accession: NZ_CP012958
• Coordinates: 1193873..1195213 (-)
• Length: 446 a.a.
• NCBI ID: WP_061869916.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans strain VT1169
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1188873..1200213

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACT74_RS05585 (ACT74_05575)	cdd	1189110..1190006 (+)	897	WP_005547383.1	cytidine deaminase	-
ACT74_RS05590 (ACT74_05580)	serS	1190085..1191401 (-)	1317	WP_005567230.1	serine--tRNA ligase	-
ACT74_RS05595 (ACT74_05585)	-	1191709..1193376 (+)	1668	WP_025298503.1	anaerobic C4-dicarboxylate transporter	-
ACT74_RS05600 (ACT74_05590)	rarA	1193873..1195213 (-)	1341	WP_061869916.1	replication-associated recombination protein A	Machinery gene
ACT74_RS05605 (ACT74_05595)	lolA	1195226..1195843 (-)	618	WP_005540265.1	outer membrane lipoprotein chaperone LolA	-
ACT74_RS05610 (ACT74_05600)	-	1195936..1198680 (-)	2745	WP_014167921.1	DNA translocase FtsK	-
ACT74_RS05615 (ACT74_05605)	lrp	1198684..1199163 (-)	480	WP_005540269.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49717.65 Da
• Isoelectric Point: 6.3254

>NTDB_id=137680 ACT74_RS05600 WP_061869916.1 1193873..1195213(-) (rarA) [Aggregatibacter actinomycetemcomitans strain VT1169]
MSNFSFDFNENDFRPLAARMRPTTLAQYCGQSHLLGEGKPLRKAIEAGYVHSMIFWGPPGTGKTTLAEIIAHRINVEVER
ISAVTSGIKEIREAIDKAKQNKLAGLRTILFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARVY
ILKPLSAQEIEQVLQQAIDDPENGLGKVRLNLQENLLSLLAEYVNGDARLALNCLEMMVDMAGESENGKILDRTLLTEVL
GERQARFDKQGDLFYDFISALHKSIRGSAPDAALYWYARIITAGGDSLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAAEGERAIAQAIVYLAVAPKSNAVYLAFKAAKKLATESADFDVPEHLRNAPTSFMKDLGFGAEYRYAHNEPNAYAA
GENYFPPQLKDTQFYFPTTRGMEIKIKEKLEWLRGLDQESGKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=137680 ACT74_RS05600 WP_061869916.1 1193873..1195213(-) (rarA) [Aggregatibacter actinomycetemcomitans strain VT1169]
ATGTCTAACTTCAGCTTTGATTTCAACGAAAATGACTTTCGCCCGCTTGCTGCAAGAATGCGCCCCACCACCTTGGCGCA
ATATTGCGGTCAGTCTCATTTATTGGGCGAAGGAAAACCGTTGCGCAAAGCTATTGAAGCGGGATATGTTCATTCCATGA
TTTTCTGGGGCCCGCCCGGCACCGGTAAAACCACCTTGGCGGAAATTATCGCCCATCGCATTAATGTGGAAGTAGAGCGC
ATTTCCGCCGTCACCAGCGGCATTAAAGAAATCCGTGAAGCCATCGACAAAGCCAAACAAAACAAACTGGCAGGTTTGCG
CACCATTTTGTTTGTAGATGAAGTGCATCGTTTCAACAAAAGCCAGCAAGACGCTTTCCTGCCGCATATTGAAGACGGCA
CCATTATTTTTATCGGCGCTACCACGGAAAATCCCTCTTTTGAACTCAATAACGCGTTGCTTTCCCGCGCGCGGGTTTAT
ATTCTAAAACCGCTTTCCGCGCAGGAAATCGAACAGGTTTTACAACAAGCCATAGATGACCCCGAAAACGGTTTGGGTAA
AGTGCGGTTAAATTTACAAGAGAATTTATTGTCCCTGTTGGCAGAATACGTCAATGGCGACGCCCGCCTTGCTTTGAACT
GCCTGGAAATGATGGTGGACATGGCGGGCGAATCGGAAAACGGCAAAATTTTAGACCGCACTTTACTCACGGAAGTGTTG
GGCGAACGGCAGGCGCGTTTTGATAAACAAGGTGACCTTTTCTACGATTTCATTTCCGCACTGCACAAATCCATTCGCGG
ATCCGCCCCTGATGCGGCGTTATACTGGTACGCGCGCATTATCACTGCCGGCGGGGATTCTCTTTATGTGGCACGTCGAT
TATTGGCAATTGCTTCCGAAGATGTGGGCAACGCTGACCCGCGCGCCATGCAGGTGGCACTTGCCGCCTGGGATTGTTTC
ACCCGCGTCGGCGCTGCCGAAGGCGAACGCGCTATTGCGCAAGCCATTGTGTATTTAGCCGTCGCACCGAAAAGCAACGC
CGTTTATCTCGCTTTCAAAGCCGCCAAAAAATTGGCAACCGAATCCGCCGATTTCGACGTCCCTGAACATCTCCGCAACG
CCCCGACCAGCTTCATGAAAGACCTCGGCTTCGGCGCCGAATACCGCTACGCCCACAATGAACCTAACGCCTACGCTGCC
GGCGAAAACTACTTCCCGCCACAACTGAAAGACACCCAATTCTATTTCCCGACCACCAGAGGCATGGAAATTAAGATTAA
GGAGAAGTTGGAATGGCTGCGGGGGTTAGATCAGGAAAGTGGTAAGAAGCGATATAAATAG

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (189-266)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-163)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	40.146	92.152	0.37