Detailed information NTG0137096

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: AOT11_RS01100
• Genome accession: NZ_CP012881
• Coordinates: 256611..257960 (-)
• Length: 449 a.a.
• NCBI ID: WP_017422279.1
• Uniprot ID: -
• Organism: Vibrio vulnificus NBRC 15645 = ATCC 27562
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 251611..262960

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AOT11_RS01085 (AOT11_08265)	bioB	252681..253733 (-)	1053	WP_017422276.1	biotin synthase BioB	-
AOT11_RS01090 (AOT11_08270)	bioA	253874..255151 (+)	1278	WP_026060836.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-
AOT11_RS01095 (AOT11_08275)	serS	255212..256519 (-)	1308	WP_017422278.1	serine--tRNA ligase	-
AOT11_RS01100 (AOT11_08280)	rarA	256611..257960 (-)	1350	WP_017422279.1	replication-associated recombination protein A	Machinery gene
AOT11_RS01105 (AOT11_08285)	lolA	257967..258563 (-)	597	WP_017422280.1	outer membrane lipoprotein chaperone LolA	-
AOT11_RS01110 (AOT11_08290)	-	258636..261593 (-)	2958	WP_017422281.1	DNA translocase FtsK	-
AOT11_RS01115 (AOT11_08295)	lrp	261738..262232 (-)	495	WP_011080767.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 49676.04 Da
• Isoelectric Point: 5.8552

>NTDB_id=137096 AOT11_RS01100 WP_017422279.1 256611..257960(-) (rarA) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
MSNYTLDFSGDEDFRPLAARMRPETIEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAANYANAEVE
RVSAVTSGVKEIRAAIEKARENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARV
YKLTSLNKEEISLALNQAINDKQRGLGNTPAHFADNVLDRLAELVNGDARMSLNYLELLYDMAEDNAQGAKEITLKLLAE
VAGEKVSRFDNKGDIWYDLISAVHKSIRGSNPDAALYWAARMISAGCDPLYIARRLLAIASEDVGNADPRAMQVALSAWD
CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHNLPEFEVPFHLRNAPTGLMKDLGYGEGYRYAHDEPGAY
AAGEQYLPAEIADRKYYQPTNRGLESKIAEKLDYLANLDANSPQKRYEK

Nucleotide

• Length: 1350 bp

>NTDB_id=137096 AOT11_RS01100 WP_017422279.1 256611..257960(-) (rarA) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
GTGTCAAATTACACCTTAGATTTTTCAGGGGACGAAGATTTTCGTCCCCTTGCTGCTCGTATGAGACCGGAAACGATCGA
ACAGTACATCGGTCAGCAGCATATTTTAGGGCCTGGTAAGCCATTGCGTCGCGCGCTTGAGGCCGGCCACATTCATTCAA
TGATTTTGTGGGGACCGCCAGGTACAGGCAAGACAACGTTAGCAGAAGTGGCTGCAAACTACGCCAACGCGGAAGTTGAA
CGCGTGTCTGCGGTCACGTCTGGCGTCAAAGAAATTCGTGCCGCAATTGAAAAAGCACGCGAGAACAAAATGGCGGGTCG
TCGCACCATCTTGTTTGTGGATGAGGTACATCGCTTTAATAAATCACAGCAAGATGCCTTCTTACCGCACATTGAAGATG
GAACAGTGACCTTTATCGGCGCGACCACAGAAAACCCATCGTTTGAACTGAACAACGCATTATTGTCACGTGCTCGTGTG
TATAAGCTTACGTCACTCAACAAAGAAGAAATCTCACTGGCATTAAACCAAGCGATCAACGATAAACAACGTGGTCTGGG
TAATACACCAGCACACTTTGCTGATAATGTCTTGGATCGTCTGGCTGAGCTCGTCAATGGTGACGCTCGAATGTCTCTGA
ACTATCTTGAGTTGCTGTATGATATGGCAGAAGACAATGCTCAGGGCGCAAAAGAGATCACACTAAAGTTACTGGCGGAA
GTGGCGGGGGAGAAGGTCTCTCGCTTTGATAATAAAGGCGATATTTGGTACGACTTAATCTCTGCCGTGCACAAATCCAT
TCGTGGATCAAACCCGGATGCTGCGCTTTATTGGGCAGCGAGAATGATCTCTGCTGGTTGTGATCCACTCTATATCGCGC
GACGTTTACTGGCCATTGCCTCTGAAGATGTGGGCAATGCGGATCCGAGGGCAATGCAAGTGGCACTTTCCGCGTGGGAT
TGCTTTACCCGTGTTGGGCCTGCAGAAGGCGAACGCGCAATTGCACAGGCGATCGTTTACCTTGCGTGCGCACCGAAAAG
TAATGCGGTCTACACCGCTTGGAAGCAAGCGCTGTCGGATGCGCATAATCTTCCAGAGTTTGAAGTGCCTTTCCATTTGC
GTAATGCGCCGACCGGATTGATGAAAGATCTCGGTTATGGGGAAGGTTATCGATACGCTCATGATGAGCCTGGAGCCTAC
GCCGCTGGTGAACAATATTTGCCTGCCGAAATCGCTGATCGCAAGTACTATCAGCCAACAAATCGAGGCTTAGAGAGCAA
AATCGCTGAAAAGTTAGATTACTTGGCTAATTTAGACGCAAATAGCCCACAAAAGCGCTATGAAAAGTAG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (54-159)

• AAA C-terminal domain (AAA_assoc_2) (189-268)

• MgsA AAA+ ATPase C terminal (MgsA_C) (269-435)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.953	94.209	0.376