Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SanJ4211_RS04075 Genome accession   NZ_CP012805
Coordinates   810114..811862 (+) Length   582 a.a.
NCBI ID   WP_057489628.1    Uniprot ID   -
Organism   Streptococcus anginosus strain J4211     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 805114..816862
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS10100 (SanJ4211_0788) - 805342..805515 (+) 174 WP_003024903.1 hypothetical protein -
  SanJ4211_RS04055 (SanJ4211_0789) clpX 805554..806786 (+) 1233 WP_021001590.1 ATP-dependent Clp protease ATP-binding subunit ClpX Regulator
  SanJ4211_RS04060 (SanJ4211_0790) yihA 806798..807385 (+) 588 WP_057489627.1 ribosome biogenesis GTP-binding protein YihA/YsxC -
  SanJ4211_RS04065 (SanJ4211_0791) - 807508..808215 (+) 708 WP_003027979.1 glucosaminidase domain-containing protein -
  SanJ4211_RS04070 (SanJ4211_0792) - 808388..810133 (+) 1746 WP_049533337.1 ABC transporter ATP-binding protein -
  SanJ4211_RS04075 (SanJ4211_0793) rcrQ 810114..811862 (+) 1749 WP_057489628.1 ABC transporter ATP-binding protein Regulator
  SanJ4211_RS04080 (SanJ4211_0794c) - 811883..813418 (-) 1536 WP_021001595.1 ATP-binding cassette domain-containing protein -
  SanJ4211_RS04085 (SanJ4211_0795c) - 813841..814581 (-) 741 WP_003024883.1 amino acid ABC transporter ATP-binding protein -
  SanJ4211_RS04090 (SanJ4211_0796c) - 814581..816764 (-) 2184 WP_003027984.1 ABC transporter substrate-binding protein/permease -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65036.41 Da        Isoelectric Point: 6.6674

>NTDB_id=136522 SanJ4211_RS04075 WP_057489628.1 810114..811862(+) (rcrQ) [Streptococcus anginosus strain J4211]
MKTRYSKSGLKRLASDLLQQRWLFLLATIGTIVQVALTIYLPILIGNAVDSVLLPDASQHLLPILSKMGMVIVANTAIQW
LNPLIYNQLIYSYSQKLRDAVIQKIHRLPLAYLDHQGSGDLVSRLTTDVEQLNNGLLMVFNQFFVGVLTILVTIVTMARI
DFFMMMLVLLLTPLSMLIARFIARKSYKLFQKQTTARGLQTQLIEESLSQESLIQSFNAQEQFITDFTKGNESYADYSQD
AIFYSSTVNPATRFVNALIYAIVVGFGAVRIINGSSFTVGQLVTFLNYVNQYTKPFNDISSVMAELQSALACAERLYMIL
DEKELVEIGKEELTSEAVRGAICFEHVRFGYEKDKPLIHDLNMTVPAGSKVAIVGPTGAGKSTLINLLMRFYNVDAGKIK
LDDRDITDYTRVSFRQQFGMVLQETWLKTATIHENIAFGRPEASREEVIAAAKAANAHFFIQQLPHGYDTYLADAGDSLS
QGQRQLLTIARVFLAVPKILILDEATSSIDTRTEVLIQEAFNKLMVGRTSFIIAHRLSTIQNADIILVLVDGDIVEYGSH
QELMQAKGVYYQMQTAQGSLAV

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=136522 SanJ4211_RS04075 WP_057489628.1 810114..811862(+) (rcrQ) [Streptococcus anginosus strain J4211]
ATGAAAACGAGGTATTCTAAAAGTGGTCTGAAACGCCTTGCAAGTGATTTGTTGCAACAGCGCTGGCTTTTCCTACTAGC
TACAATTGGAACAATTGTTCAGGTTGCTTTGACCATTTATTTGCCAATTTTGATTGGGAATGCAGTTGATAGTGTTCTAC
TTCCTGATGCAAGTCAGCATTTGCTTCCAATTCTCTCGAAAATGGGTATGGTGATTGTTGCCAATACAGCGATTCAATGG
CTCAATCCTTTAATCTATAATCAGTTGATTTATAGTTATAGTCAGAAACTTCGGGACGCAGTTATTCAAAAAATTCATCG
ACTTCCCTTGGCTTATCTTGATCATCAAGGGAGTGGTGATTTAGTGAGTCGCTTGACGACGGACGTGGAGCAGTTAAATA
ATGGTCTGCTCATGGTCTTCAATCAGTTTTTTGTAGGCGTGTTGACTATTCTTGTAACGATTGTAACAATGGCAAGGATT
GACTTTTTCATGATGATGTTAGTCTTGCTTTTAACTCCCTTATCTATGCTGATTGCACGTTTTATAGCCCGTAAAAGCTA
CAAGCTGTTTCAAAAACAAACGACGGCACGAGGGCTTCAGACACAGCTCATTGAAGAAAGTCTCTCTCAAGAAAGTTTGA
TTCAAAGTTTTAATGCTCAAGAGCAATTCATTACGGATTTTACAAAAGGCAATGAGAGCTATGCAGACTATTCTCAGGAT
GCTATCTTTTATTCCTCTACTGTCAATCCAGCGACTCGCTTCGTGAATGCTCTTATTTATGCTATTGTTGTTGGATTTGG
TGCGGTTCGTATCATTAACGGCTCTAGTTTCACAGTTGGACAATTAGTGACATTCTTAAATTATGTCAACCAATACACCA
AGCCATTCAACGACATTTCGTCTGTCATGGCCGAATTACAAAGCGCCCTTGCTTGTGCAGAGCGCTTGTACATGATTTTA
GATGAAAAGGAACTTGTAGAAATTGGAAAAGAAGAACTCACGAGTGAAGCAGTACGGGGTGCGATTTGTTTTGAGCACGT
CCGTTTTGGTTATGAAAAAGATAAACCTTTGATTCACGATTTAAACATGACCGTTCCAGCAGGAAGCAAAGTTGCTATTG
TTGGACCAACTGGTGCTGGAAAATCCACTTTAATCAATCTCCTCATGCGTTTTTATAATGTAGATGCGGGTAAGATTAAG
TTAGACGACAGAGATATTACAGATTATACCAGAGTCTCATTTCGCCAGCAGTTTGGTATGGTTTTACAAGAAACATGGCT
GAAGACAGCGACGATTCATGAAAATATTGCTTTTGGGCGACCAGAGGCTAGCCGAGAAGAAGTAATTGCAGCAGCTAAAG
CTGCTAATGCTCATTTCTTTATCCAGCAATTGCCGCATGGCTATGATACTTATCTAGCAGATGCAGGAGATTCTTTGTCA
CAAGGACAACGCCAGCTATTGACCATTGCGCGTGTTTTTCTAGCGGTTCCTAAAATCCTGATTTTGGATGAAGCAACCTC
CTCTATTGATACGCGGACTGAAGTACTCATTCAAGAGGCTTTTAATAAGCTCATGGTAGGGCGAACCAGTTTTATCATTG
CTCATCGCTTGTCTACCATTCAGAATGCAGATATCATTTTAGTGCTGGTTGACGGAGATATTGTGGAATATGGCAGTCAT
CAAGAGCTGATGCAAGCAAAAGGCGTTTATTACCAAATGCAGACGGCTCAAGGAAGTTTGGCGGTTTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(359-507)

ABC transporter transmembrane region (ABC_membrane)

(25-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.551

99.485

0.393