Detailed information NTG0136261

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: FORC17_RS09590
• Genome accession: NZ_CP012739
• Coordinates: 2070564..2071913 (-)
• Length: 449 a.a.
• NCBI ID: WP_060532019.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_017
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2065564..2076913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC17_RS09575 (FORC17_1877)	bioB	2066634..2067686 (-)	1053	WP_065090579.1	biotin synthase BioB	-
FORC17_RS09580 (FORC17_1878)	bioA	2067827..2069104 (+)	1278	WP_065090580.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-
FORC17_RS09585 (FORC17_1879)	serS	2069165..2070472 (-)	1308	WP_045597741.1	serine--tRNA ligase	-
FORC17_RS09590 (FORC17_1880)	rarA	2070564..2071913 (-)	1350	WP_060532019.1	replication-associated recombination protein A	Machinery gene
FORC17_RS25080 (FORC17_1881)	lolA	2071920..2072516 (-)	597	WP_065090581.1	outer membrane lipoprotein chaperone LolA	-
FORC17_RS09600 (FORC17_1882)	-	2072589..2075546 (-)	2958	WP_065090582.1	DNA translocase FtsK	-
FORC17_RS09605 (FORC17_1883)	lrp	2075691..2076185 (-)	495	WP_011080767.1	leucine-responsive transcriptional regulator Lrp	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 49706.02 Da
• Isoelectric Point: 5.6773

>NTDB_id=136261 FORC17_RS09590 WP_060532019.1 2070564..2071913(-) (rarA) [Vibrio vulnificus strain FORC_017]
MSNYTLDFSGDEDFRPLAARMRPETVEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAANYANAEVE
RVSAVTSGVKDIRAAIEKARENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARV
YKLTSLNKEEISLALNQAINDKQRGLGNTPAHFADNVLDRLAELVNGDARMSLNYLELLYDMAEDNAQGEKEITLKLLAE
VAGEKVSRFDNKGDIWYDLISAVHKSIRGSNPDAALYWSARMIAAGCDPLYIARRLLAIASEDVGNADPRAMQVALSAWD
CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHNLPEFEVPFHLRNAPTGLMKDLGYGEGYRYAHDEPGAY
AAGEQYLPAEIADRKYYQPTNRGLESKIAEKLDYLANLDANSPQKRYEK

Nucleotide

• Length: 1350 bp

>NTDB_id=136261 FORC17_RS09590 WP_060532019.1 2070564..2071913(-) (rarA) [Vibrio vulnificus strain FORC_017]
GTGTCAAATTACACCTTAGATTTTTCAGGGGACGAAGATTTTCGTCCCCTTGCTGCTCGTATGAGACCGGAAACGGTCGA
ACAGTACATCGGTCAGCAGCATATTTTAGGCCCTGGTAAGCCATTACGTCGCGCGCTAGAGGCCGGCCACATTCATTCAA
TGATTCTGTGGGGACCTCCAGGTACAGGCAAGACGACATTAGCGGAAGTAGCCGCAAACTACGCCAATGCGGAAGTTGAA
CGCGTCTCTGCGGTCACGTCCGGCGTGAAAGACATTCGGGCTGCAATTGAAAAAGCACGCGAGAACAAAATGGCGGGTCG
TCGCACCATCTTGTTTGTGGATGAGGTGCATCGCTTTAATAAATCACAGCAAGATGCCTTCTTACCGCACATTGAAGATG
GAACAGTGACTTTTATCGGCGCGACCACAGAAAATCCATCGTTTGAGCTGAACAATGCATTATTGTCACGTGCTCGTGTG
TATAAGCTTACGTCACTCAACAAAGAAGAAATCTCACTAGCGTTAAACCAAGCGATCAACGATAAACAACGTGGTCTGGG
TAATACACCAGCACACTTTGCTGATAATGTCTTGGATCGTCTGGCTGAGCTCGTCAATGGTGATGCGCGAATGTCTCTTA
ACTATCTTGAGCTGCTGTATGACATGGCAGAAGACAATGCTCAGGGTGAAAAAGAGATCACGCTAAAGTTATTGGCGGAA
GTGGCGGGGGAGAAGGTCTCTCGTTTTGATAATAAAGGCGACATTTGGTACGACTTAATCTCTGCCGTGCACAAATCCAT
TCGCGGCTCAAACCCGGACGCTGCGCTTTATTGGTCGGCGAGAATGATCGCTGCCGGTTGTGATCCACTCTATATCGCGC
GACGTTTGCTGGCCATTGCCTCTGAAGATGTGGGCAATGCGGATCCGAGGGCAATGCAAGTGGCACTTTCCGCGTGGGAT
TGCTTTACCCGTGTTGGACCCGCAGAAGGCGAACGCGCAATTGCACAGGCGATCGTTTACCTTGCGTGCGCACCGAAAAG
TAATGCGGTCTACACCGCTTGGAAGCAAGCGCTGTCGGATGCACATAATCTTCCTGAATTTGAAGTGCCTTTCCATTTGC
GTAATGCACCGACCGGATTGATGAAAGATCTTGGTTATGGGGAAGGTTATCGATACGCTCATGATGAACCAGGGGCCTAC
GCCGCGGGCGAACAATATTTGCCTGCCGAAATCGCTGATCGCAAGTACTATCAGCCAACAAATCGAGGCTTAGAGAGCAA
AATCGCTGAAAAGTTAGATTACTTGGCTAATTTAGACGCAAATAGCCCACAAAAGCGCTATGAAAAGTAG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (54-159)

• MgsA AAA+ ATPase C terminal (MgsA_C) (269-435)

• AAA C-terminal domain (AAA_assoc_2) (189-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	40.189	94.209	0.379