Detailed information
Bioinformatically predicted
Overview
| Name | rarA | Type | Machinery gene |
| Locus tag | AN924_RS05825 | Genome accession | NZ_CP012731 |
| Coordinates | 1142872..1144158 (-) | Length | 428 a.a. |
| NCBI ID | WP_062897085.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain 90-1330 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1137872..1149158
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN924_RS11530 (AN924_12120) | - | 1139669..1139803 (+) | 135 | WP_002939130.1 | hypothetical protein | - |
| AN924_RS05795 (AN924_12130) | - | 1139805..1141151 (+) | 1347 | WP_009910991.1 | bifunctional metallophosphatase/5'-nucleotidase | - |
| AN924_RS05800 (AN924_12140) | - | 1141153..1141647 (+) | 495 | WP_002939125.1 | GNAT family N-acetyltransferase | - |
| AN924_RS05810 (AN924_12150) | nrdG | 1141834..1142391 (+) | 558 | WP_002939123.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| AN924_RS05825 (AN924_12170) | rarA | 1142872..1144158 (-) | 1287 | WP_062897085.1 | replication-associated recombination protein A | Machinery gene |
| AN924_RS05830 (AN924_12180) | - | 1144232..1144702 (+) | 471 | WP_002939116.1 | DUF3013 family protein | - |
| AN924_RS05835 (AN924_12190) | - | 1144704..1145057 (+) | 354 | WP_009910982.1 | ASCH domain-containing protein | - |
| AN924_RS05840 (AN924_12200) | prmA | 1145653..1146606 (+) | 954 | WP_002939103.1 | 50S ribosomal protein L11 methyltransferase | - |
| AN924_RS05845 (AN924_12210) | - | 1146608..1147354 (+) | 747 | WP_002939095.1 | 16S rRNA (uracil(1498)-N(3))-methyltransferase | - |
| AN924_RS05850 (AN924_12220) | - | 1147368..1148630 (+) | 1263 | WP_002939093.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 428 a.a. Molecular weight: 47350.04 Da Isoelectric Point: 6.5833
>NTDB_id=136175 AN924_RS05825 WP_062897085.1 1142872..1144158(-) (rarA) [Streptococcus suis strain 90-1330]
MPANLALRMRPKSIDEVIGQEHLVGPGKIIRRMIDANMLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATTDNQKRL
QEIAEEAKFSGGLVLMLDEIHRLNKTKQDFLLPLLENGNIIMIGATTENPFFSILPAIRSRVQIFELQPLKTSHIRQALE
LALTDSERGFDFPVTIEPEALDFLANATNGDLRAAYNSLELAVLSTKESDDGSRHIDLDAVENSLQKSYISMDKNGDAHY
DILSALQKSIRGSDVNASLHYAARLIEAEDLPSLARRLTVIAYEDIGLANPEAQIHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRKNGHLPIPNHLRDGHYAGSKELGNAIGYQYPHAYPEKWVDQQYLPDKLLAADYFTA
NYTGKYERALGMTQEKIKNLKKNRRQNP
MPANLALRMRPKSIDEVIGQEHLVGPGKIIRRMIDANMLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATTDNQKRL
QEIAEEAKFSGGLVLMLDEIHRLNKTKQDFLLPLLENGNIIMIGATTENPFFSILPAIRSRVQIFELQPLKTSHIRQALE
LALTDSERGFDFPVTIEPEALDFLANATNGDLRAAYNSLELAVLSTKESDDGSRHIDLDAVENSLQKSYISMDKNGDAHY
DILSALQKSIRGSDVNASLHYAARLIEAEDLPSLARRLTVIAYEDIGLANPEAQIHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYLAMDAALADLRKNGHLPIPNHLRDGHYAGSKELGNAIGYQYPHAYPEKWVDQQYLPDKLLAADYFTA
NYTGKYERALGMTQEKIKNLKKNRRQNP
Nucleotide
Download Length: 1287 bp
>NTDB_id=136175 AN924_RS05825 WP_062897085.1 1142872..1144158(-) (rarA) [Streptococcus suis strain 90-1330]
ATGCCAGCCAATCTCGCCCTTCGTATGCGGCCCAAATCCATTGATGAAGTCATCGGTCAGGAACACCTGGTCGGTCCTGG
AAAGATTATCCGTCGCATGATTGATGCCAATATGCTGTCGTCCATGATTCTCTACGGTCCGCCAGGGATTGGTAAGACCT
CGATTGCGTCCGCCATTGCTGGTACGACCAAGTATGCCTTTCGAACCTTTAATGCCACGACAGACAACCAAAAACGCCTG
CAGGAAATCGCTGAAGAAGCTAAATTTTCTGGTGGCCTGGTCCTCATGCTCGATGAAATCCACCGCCTCAACAAGACTAA
ACAGGACTTCCTGCTTCCTCTTTTGGAAAACGGCAATATCATCATGATTGGAGCAACGACGGAAAATCCCTTCTTCTCAA
TTTTGCCTGCCATTCGCAGTCGGGTGCAGATTTTTGAATTACAACCTTTGAAAACCAGTCACATCCGACAGGCCTTGGAA
CTGGCTCTGACAGACAGCGAACGTGGTTTTGATTTTCCCGTCACCATTGAACCTGAGGCCCTGGATTTTCTGGCAAATGC
GACAAACGGTGACCTTCGTGCCGCTTACAATTCTCTAGAACTGGCTGTGCTTTCGACCAAGGAAAGTGACGACGGTAGCC
GCCACATTGATCTGGACGCCGTGGAAAATAGCCTGCAAAAGTCCTACATCAGCATGGACAAGAACGGCGATGCCCACTAC
GATATCCTCTCCGCCCTACAAAAATCCATTCGAGGTAGCGATGTCAATGCCAGCCTCCACTACGCCGCTCGTTTGATTGA
GGCCGAAGATCTGCCTAGTCTGGCCCGTCGCTTGACGGTCATTGCCTACGAAGACATCGGCTTGGCCAATCCAGAGGCTC
AGATTCATACGGTGACGGCCCTTGAAGCCGCCCAGAAAATTGGCTTTCCAGAGGCACGCATTTTGATTGCCAATGTGGTG
ATTGATTTGGCTCTTTCTCCCAAGTCCAATTCTGCCTATCTGGCTATGGATGCAGCTCTGGCTGATTTGCGGAAAAACGG
CCATCTGCCCATTCCAAATCATCTTCGGGATGGCCACTATGCTGGCAGCAAGGAGCTGGGAAATGCTATTGGCTACCAGT
ATCCGCATGCCTATCCTGAAAAATGGGTGGACCAGCAATACCTGCCCGATAAGTTACTAGCTGCGGACTACTTCACCGCC
AACTACACTGGAAAATACGAGCGTGCCTTGGGCATGACACAAGAAAAGATAAAAAATTTGAAAAAAAATAGACGCCAAAA
TCCTTGA
ATGCCAGCCAATCTCGCCCTTCGTATGCGGCCCAAATCCATTGATGAAGTCATCGGTCAGGAACACCTGGTCGGTCCTGG
AAAGATTATCCGTCGCATGATTGATGCCAATATGCTGTCGTCCATGATTCTCTACGGTCCGCCAGGGATTGGTAAGACCT
CGATTGCGTCCGCCATTGCTGGTACGACCAAGTATGCCTTTCGAACCTTTAATGCCACGACAGACAACCAAAAACGCCTG
CAGGAAATCGCTGAAGAAGCTAAATTTTCTGGTGGCCTGGTCCTCATGCTCGATGAAATCCACCGCCTCAACAAGACTAA
ACAGGACTTCCTGCTTCCTCTTTTGGAAAACGGCAATATCATCATGATTGGAGCAACGACGGAAAATCCCTTCTTCTCAA
TTTTGCCTGCCATTCGCAGTCGGGTGCAGATTTTTGAATTACAACCTTTGAAAACCAGTCACATCCGACAGGCCTTGGAA
CTGGCTCTGACAGACAGCGAACGTGGTTTTGATTTTCCCGTCACCATTGAACCTGAGGCCCTGGATTTTCTGGCAAATGC
GACAAACGGTGACCTTCGTGCCGCTTACAATTCTCTAGAACTGGCTGTGCTTTCGACCAAGGAAAGTGACGACGGTAGCC
GCCACATTGATCTGGACGCCGTGGAAAATAGCCTGCAAAAGTCCTACATCAGCATGGACAAGAACGGCGATGCCCACTAC
GATATCCTCTCCGCCCTACAAAAATCCATTCGAGGTAGCGATGTCAATGCCAGCCTCCACTACGCCGCTCGTTTGATTGA
GGCCGAAGATCTGCCTAGTCTGGCCCGTCGCTTGACGGTCATTGCCTACGAAGACATCGGCTTGGCCAATCCAGAGGCTC
AGATTCATACGGTGACGGCCCTTGAAGCCGCCCAGAAAATTGGCTTTCCAGAGGCACGCATTTTGATTGCCAATGTGGTG
ATTGATTTGGCTCTTTCTCCCAAGTCCAATTCTGCCTATCTGGCTATGGATGCAGCTCTGGCTGATTTGCGGAAAAACGG
CCATCTGCCCATTCCAAATCATCTTCGGGATGGCCACTATGCTGGCAGCAAGGAGCTGGGAAATGCTATTGGCTACCAGT
ATCCGCATGCCTATCCTGAAAAATGGGTGGACCAGCAATACCTGCCCGATAAGTTACTAGCTGCGGACTACTTCACCGCC
AACTACACTGGAAAATACGAGCGTGCCTTGGGCATGACACAAGAAAAGATAAAAAATTTGAAAAAAAATAGACGCCAAAA
TCCTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rarA | Bacillus subtilis subsp. subtilis str. 168 |
59.809 |
97.664 |
0.584 |