Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | PJ18_RS05340 | Genome accession | NZ_CP010307 |
| Coordinates | 1012850..1013152 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain 00-6200 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1007850..1018152
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PJ18_RS05315 (PJ18_05315) | rpsR | 1008212..1008472 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| PJ18_RS05320 (PJ18_05320) | lon | 1008533..1010908 (-) | 2376 | WP_002858084.1 | endopeptidase La | - |
| PJ18_RS05325 (PJ18_05325) | - | 1010925..1011572 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| PJ18_RS05330 (PJ18_05330) | fliW | 1011733..1012122 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| PJ18_RS05335 (PJ18_05335) | proC | 1012122..1012853 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| PJ18_RS05340 (PJ18_05340) | ctsT | 1012850..1013152 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| PJ18_RS05345 (PJ18_05345) | - | 1013149..1013811 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| PJ18_RS05350 (PJ18_05350) | - | 1013808..1014260 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| PJ18_RS05355 (PJ18_05355) | hemD | 1014257..1014886 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| PJ18_RS05360 (PJ18_05360) | thiE | 1014864..1015496 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| PJ18_RS05365 (PJ18_05365) | thiD | 1015486..1016298 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| PJ18_RS05370 (PJ18_05370) | - | 1016295..1016981 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| PJ18_RS05375 (PJ18_05375) | - | 1016978..1017739 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=136175 PJ18_RS05340 WP_002853046.1 1012850..1013152(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain 00-6200]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=136175 PJ18_RS05340 WP_002853046.1 1012850..1013152(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain 00-6200]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |