Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   PJ16_RS07455 Genome accession   NZ_CP010301
Coordinates   1383650..1384165 (-) Length   171 a.a.
NCBI ID   WP_043012922.1    Uniprot ID   A0A5T1ZA66
Organism   Campylobacter jejuni subsp. jejuni strain 00-0949     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1378650..1389165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PJ16_RS07440 (PJ16_07440) - 1378760..1380577 (-) 1818 WP_043020469.1 motility associated factor glycosyltransferase family protein -
  PJ16_RS07445 (PJ16_07445) - 1380574..1382397 (-) 1824 WP_043020470.1 motility associated factor glycosyltransferase family protein -
  PJ16_RS07450 (PJ16_07450) - 1382409..1383650 (-) 1242 WP_043012921.1 DUF2920 family protein -
  PJ16_RS07455 (PJ16_07455) ctsG 1383650..1384165 (-) 516 WP_043012922.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  PJ16_RS07460 (PJ16_07460) tsaD 1384166..1385173 (-) 1008 WP_002886115.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  PJ16_RS07465 (PJ16_07465) - 1385170..1386564 (-) 1395 Protein_1446 M99 family carboxypeptidase catalytic domain-containing protein -
  PJ16_RS07470 (PJ16_07470) dxr 1386566..1387636 (-) 1071 WP_002860792.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  PJ16_RS07475 (PJ16_07475) cdsA 1387633..1388358 (-) 726 WP_002875974.1 phosphatidate cytidylyltransferase -
  PJ16_RS07480 (PJ16_07480) - 1388367..1388705 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18762.64 Da        Isoelectric Point: 7.2441

>NTDB_id=136105 PJ16_RS07455 WP_043012922.1 1383650..1384165(-) (ctsG) [Campylobacter jejuni subsp. jejuni strain 00-0949]
MRKAFTILELVFVIVILGILAAIALPKMSSSKHEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYFLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=136105 PJ16_RS07455 WP_043012922.1 1383650..1384165(-) (ctsG) [Campylobacter jejuni subsp. jejuni strain 00-0949]
ATGAGAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATTGTTATCTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGCATGAAGCCGAGGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAACGATATAAGCATTT
ATACTTTGAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATTTTTTAATAGGGGGAATGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T1ZA66

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment