Detailed information NTG0134056

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: QR42_RS12100
• Genome accession: NZ_CP010075
• Coordinates: 2396832..2399216 (-)
• Length: 794 a.a.
• NCBI ID: WP_024423121.1
• Uniprot ID: -
• Organism: Bacillus sp. WP8
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2391832..2404216

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QR42_RS12070 (QR42_12070)	-	2392854..2393582 (+)	729	WP_024423116.1	amino acid ABC transporter ATP-binding protein	-
QR42_RS12075 (QR42_12075)	-	2393596..2394405 (+)	810	WP_039180269.1	transporter substrate-binding domain-containing protein	-
QR42_RS12080 (QR42_12080)	-	2394483..2395136 (+)	654	WP_039180271.1	amino acid ABC transporter permease	-
QR42_RS12085 (QR42_12085)	-	2395152..2395802 (+)	651	WP_039180274.1	amino acid ABC transporter permease	-
QR42_RS19085	-	2395883..2396014 (-)	132	WP_064497881.1	YrzQ family protein	-
QR42_RS12090 (QR42_12090)	-	2396035..2396226 (-)	192	WP_003216308.1	hypothetical protein	-
QR42_RS12095 (QR42_12095)	-	2396240..2396758 (-)	519	WP_052196552.1	PRC-barrel domain-containing protein	-
QR42_RS12100 (QR42_12100)	recD2	2396832..2399216 (-)	2385	WP_024423121.1	ATP-dependent RecD-like DNA helicase	Machinery gene
QR42_RS12105 (QR42_12105)	-	2399236..2399889 (-)	654	WP_025092425.1	tetratricopeptide repeat protein	-
QR42_RS12110 (QR42_12110)	mnmA	2399950..2401068 (-)	1119	WP_039180282.1	tRNA 2-thiouridine(34) synthase MnmA	-
QR42_RS12115 (QR42_12115)	-	2401163..2402305 (-)	1143	WP_039180285.1	cysteine desulfurase family protein	-
QR42_RS12120 (QR42_12120)	-	2402324..2402743 (-)	420	WP_024423125.1	Rrf2 family transcriptional regulator	-

Sequence

Protein

• Length: 794 a.a.
• Molecular weight: 89073.59 Da
• Isoelectric Point: 5.2068

>NTDB_id=134056 QR42_RS12100 WP_024423121.1 2396832..2399216(-) (recD2) [Bacillus sp. WP8]
MQEHPDQMKLEDEPFLKGTIQAVIFHNESNLYSVLKVKVIETSENLEEKTASVTGYFPALHEEETYTFYGKVTSHPKFGE
QFQATHFQKEVPTTKQGIIHYLSSDLFEGIGKKTAEEIVGQLGNQTLHKIMRDPAVLYDVPRLSKKKADKLAAALQEHQG
LEQIMISLNQYGFGPQLSMKIYQVYESETLQKIEENPYQLVKDVEGIGFIKADELGARTGISGNDPERIRAALLYTVETA
SLQDGHTYIQTKDLIVETRKLLNQTGNDYKVTEMDVANQIIALGEGKEMIIEDDRCYHPSLFYAEQSVAKRIQKIVSQTE
YADQFPESEFLLALGELEERLGVQYAPTQKEAIQKALMSPMLLLTGGPGTGKTTVIKGIVELYSDLHGVSLDPSDYKKDE
SFPFVLAAPTGRAAKRMTESTGLPAVTIHRLLGWNGSEGFSHDEEQPIEGKLVIIDESSMLDIWLANHLFKAIPDHIQVI
MVGDEHQLPSVGPGQVLRDLLASKAVPAVTLTDIYRQADGSTIVELAHDMKNGVLPKDITARSKDRSFIQCSADQMKEVI
EKVVSNAAQKGFSAKDIQVLAPMYKGKAGINELNKMLQHILNPKKPKGREIPFGDVVYRTGDKVLQLVNQPENNIFNGDI
GEIVSIFYAKENTEKEDMAVISFDGNEITFTKKDFHQFTHAYCCSIHKSQGSEFPIVVLPVVRSYYRMLRRNLLYTAITR
SKKFLILCGEESALEWGVKNNEDSLRQTSLTMRLVQTEQIMDAELEALQKELPFSVHDANIGMEGITPFDFMHE

Nucleotide

• Length: 2385 bp

>NTDB_id=134056 QR42_RS12100 WP_024423121.1 2396832..2399216(-) (recD2) [Bacillus sp. WP8]
GTGCAGGAACATCCAGATCAAATGAAGCTTGAGGACGAACCGTTTTTAAAGGGGACCATTCAAGCCGTTATTTTCCATAA
TGAAAGTAATTTATACTCGGTGTTAAAGGTGAAAGTCATTGAAACATCGGAAAACTTAGAGGAAAAAACAGCATCTGTCA
CAGGCTACTTCCCCGCACTTCATGAGGAGGAAACCTACACCTTTTATGGCAAAGTCACAAGCCATCCGAAATTTGGTGAA
CAGTTTCAGGCCACTCATTTTCAAAAGGAAGTACCGACAACGAAGCAAGGCATTATACATTATCTCTCAAGTGATTTATT
TGAGGGGATAGGAAAAAAGACGGCGGAAGAAATCGTGGGACAGCTTGGCAATCAGACGCTTCATAAAATTATGCGTGACC
CAGCTGTTTTGTACGATGTACCGCGCTTATCCAAAAAGAAGGCGGATAAGCTGGCCGCAGCGCTTCAGGAGCATCAAGGA
CTGGAACAAATCATGATCAGCCTGAATCAATATGGCTTTGGTCCGCAGCTCAGCATGAAGATTTACCAAGTGTACGAGAG
TGAAACGCTGCAAAAGATCGAGGAAAATCCGTATCAGCTTGTTAAGGATGTTGAGGGGATCGGATTTATTAAGGCGGATG
AGCTCGGCGCTAGAACAGGCATCTCAGGTAATGATCCAGAGCGGATTCGCGCAGCCTTGCTATATACAGTGGAGACAGCC
AGTCTACAGGACGGTCATACGTACATACAAACGAAAGATTTGATCGTCGAAACCCGCAAGCTGCTCAACCAAACAGGCAA
TGATTACAAAGTGACTGAAATGGATGTTGCCAATCAGATCATTGCACTTGGCGAAGGAAAAGAAATGATCATTGAAGATG
ACCGCTGCTATCATCCATCCTTATTTTACGCGGAGCAAAGTGTTGCCAAACGCATTCAAAAAATCGTCTCCCAAACAGAA
TACGCGGATCAATTTCCTGAATCAGAATTCCTGCTTGCACTTGGTGAGTTGGAGGAGCGGTTAGGCGTCCAGTATGCACC
GACACAAAAGGAAGCGATTCAAAAGGCACTCATGTCCCCAATGCTGCTTTTAACAGGTGGGCCTGGTACAGGGAAGACGA
CGGTCATTAAAGGAATTGTCGAGCTTTACAGTGATCTTCACGGTGTATCTCTTGATCCGAGTGATTATAAAAAGGATGAA
TCCTTCCCATTTGTACTTGCGGCACCAACTGGACGGGCGGCTAAACGGATGACAGAATCAACAGGGCTTCCAGCTGTCAC
CATTCACCGGCTGCTAGGCTGGAACGGGTCGGAGGGCTTCTCGCATGATGAGGAACAGCCGATTGAAGGAAAGCTTGTCA
TCATTGATGAATCAAGTATGCTGGATATTTGGCTGGCGAATCATTTGTTTAAAGCCATTCCTGATCATATCCAGGTGATT
ATGGTAGGGGATGAACATCAGCTGCCATCAGTTGGACCAGGTCAAGTTTTACGGGATTTGCTTGCCTCAAAAGCTGTGCC
GGCTGTTACCCTGACAGATATTTACCGGCAGGCAGACGGCTCAACAATTGTTGAACTTGCCCATGATATGAAAAATGGTG
TGCTGCCAAAGGATATTACTGCACGCTCAAAGGATCGGTCCTTCATTCAATGTTCAGCTGATCAAATGAAAGAAGTCATT
GAGAAAGTTGTCAGCAATGCTGCTCAAAAAGGGTTTTCGGCAAAGGACATTCAAGTACTCGCACCAATGTATAAAGGAAA
AGCAGGCATCAATGAGCTCAACAAAATGCTGCAGCACATTTTGAATCCTAAAAAACCAAAAGGCAGAGAAATCCCGTTTG
GTGATGTGGTGTACCGAACAGGTGATAAAGTGCTTCAGCTTGTGAATCAGCCAGAGAACAATATCTTTAACGGCGATATC
GGCGAAATTGTCTCGATTTTTTATGCAAAAGAAAATACAGAAAAAGAAGACATGGCCGTGATCTCCTTTGATGGAAATGA
AATCACCTTTACGAAAAAGGATTTTCATCAATTTACACATGCCTATTGCTGCTCCATCCACAAATCACAAGGCAGTGAAT
TTCCGATTGTTGTGCTGCCAGTTGTGAGGAGCTATTACCGAATGCTTCGGCGTAATCTGCTGTACACAGCGATTACACGA
AGTAAAAAGTTTTTAATACTGTGCGGCGAGGAATCAGCGCTGGAGTGGGGCGTGAAAAACAATGAGGATTCCCTCAGACA
AACGTCCTTAACGATGCGGCTTGTGCAAACCGAACAAATCATGGATGCAGAACTTGAAGCGCTCCAAAAAGAGCTTCCGT
TTAGCGTACATGACGCAAATATTGGCATGGAGGGAATCACTCCGTTTGATTTTATGCATGAGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-248)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (593-659)

• AAA domain (AAA_30) (345-553)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (680-728)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	79.648	100	0.798