Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   Mpt1_RS07175 Genome accession   NZ_CP010070
Coordinates   1479895..1481733 (+) Length   612 a.a.
NCBI ID   WP_048113507.1    Uniprot ID   A0A0A7LE80
Organism   Candidatus Methanoplasma termitum strain MpT1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1474895..1486733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Mpt1_RS07155 (Mpt1_c14480) - 1475329..1476165 (-) 837 WP_048113500.1 TatD family hydrolase -
  Mpt1_RS07160 (Mpt1_c14490) priS 1476218..1477441 (+) 1224 WP_048113503.1 DNA primase catalytic subunit PriS -
  Mpt1_RS07165 (Mpt1_c14500) - 1477524..1477964 (+) 441 WP_052399339.1 MarR family winged helix-turn-helix transcriptional regulator -
  Mpt1_RS07170 (Mpt1_c14510) - 1478066..1479898 (+) 1833 WP_048113505.1 ABC transporter ATP-binding protein -
  Mpt1_RS07175 (Mpt1_c14520) rcrQ 1479895..1481733 (+) 1839 WP_048113507.1 ABC transporter ATP-binding protein Regulator
  Mpt1_RS07180 (Mpt1_c14530) rpl18a 1481801..1482025 (+) 225 WP_048113508.1 50S ribosomal protein L18Ae -
  Mpt1_RS07185 (Mpt1_c14540) pfdA 1482028..1482453 (+) 426 WP_048113511.1 prefoldin subunit alpha -
  Mpt1_RS07835 (Mpt1_c14550) ftsY 1482461..1484161 (+) 1701 WP_082007297.1 signal recognition particle-docking protein FtsY -
  Mpt1_RS07195 (Mpt1_c14560) - 1484183..1485403 (-) 1221 WP_048113513.1 M20 family metallo-hydrolase -
  Mpt1_RS07200 (Mpt1_c14570) - 1485490..1486668 (-) 1179 WP_048113516.1 acetyl-CoA C-acetyltransferase -

Sequence

Protein


Download         Length: 612 a.a.        Molecular weight: 67989.68 Da        Isoelectric Point: 7.8736

>NTDB_id=133988 Mpt1_RS07175 WP_048113507.1 1479895..1481733(+) (rcrQ) [Candidatus Methanoplasma termitum strain MpT1]
MSDERPINNSNRGPGRNRVTEKPKDFKGTWVKLIRYGKNFLPLIIIVMAVVCVSTALQVISPIYLGDMATAISDIINLHS
PNFLKPLDMDYIVGIGMLLIFMFAFVAMFNFTQGWILATVTQKISKQMRTDVSKKINRLPFRFFHKTSYGDVMSYLTNDI
DTIGMTLNQSLSGLFTSVALLVGSVIAMLFTNWIMAATAILSSLAGFALMAVIIKRSQRYFAAQQRDLGNVNGHVEEAYT
GHTIIKAYNNSKAFRQKFEDINNKLYVSGWKSQFFSGLTFPLMSFVGNFGYVMVSIVGAVLVVNGSIPFGTIVTFMIFVR
LFTQPLAQLAQAVTTLQRTAAASERVFTFLEVEEMEDESQKVKRLTGVKGHVEFKNVKFGYVPEKTVIHNFSADVKAGQK
IAIVGPTGAGKTTLVNLLMRFYEVDGGEILIDGVPTSEVPREDVHNQFGMVLQDTWLFEGTIKENIIYSEKNITDEQVEN
ACKTVGLDHFIQTLPDKYDTVLNESMSLSEGQKQLLTIARAIIKDSPLLILDEATSSVDTRTERIVQAAMDKLTVGRTSF
VIAHRLSTIKNADKILVIRDGDVVESGSHDQLLAKNGFYAGLYNSQFEGCDG

Nucleotide


Download         Length: 1839 bp        

>NTDB_id=133988 Mpt1_RS07175 WP_048113507.1 1479895..1481733(+) (rcrQ) [Candidatus Methanoplasma termitum strain MpT1]
ATGAGTGATGAAAGACCTATAAACAACTCCAACCGCGGTCCCGGACGAAACCGTGTAACAGAAAAGCCAAAAGATTTTAA
AGGAACATGGGTCAAACTGATCAGGTATGGTAAGAATTTCCTTCCGCTCATTATCATCGTGATGGCGGTGGTGTGCGTTT
CGACTGCATTACAGGTCATATCTCCAATTTACCTCGGAGACATGGCAACAGCGATCAGCGACATCATCAACCTCCACAGT
CCGAATTTCCTTAAGCCTTTGGACATGGATTACATAGTGGGCATAGGAATGCTGCTGATATTCATGTTTGCGTTCGTTGC
CATGTTCAACTTCACTCAGGGGTGGATACTGGCAACTGTCACTCAAAAGATATCAAAACAGATGAGGACAGATGTCTCGA
AGAAGATCAACCGTCTGCCGTTCCGCTTCTTCCATAAGACAAGCTACGGCGATGTCATGAGTTATCTGACAAATGACATC
GACACCATCGGAATGACCCTGAACCAGAGCCTTTCTGGACTATTCACATCGGTAGCGCTGCTTGTCGGTTCGGTGATAGC
GATGCTCTTCACCAACTGGATAATGGCCGCTACAGCTATATTGTCAAGCTTGGCCGGGTTTGCGCTGATGGCAGTGATCA
TAAAAAGGTCTCAAAGATACTTTGCCGCTCAACAGCGCGATCTCGGAAACGTGAACGGCCACGTCGAGGAAGCGTACACA
GGCCACACGATAATAAAGGCCTACAACAACAGCAAAGCGTTCAGGCAAAAATTCGAAGATATAAACAACAAGCTTTACGT
AAGCGGATGGAAATCCCAATTCTTCTCCGGACTGACGTTCCCTCTGATGTCTTTCGTCGGAAACTTCGGTTATGTGATGG
TCAGCATTGTCGGAGCCGTGCTCGTTGTGAATGGCTCGATCCCTTTCGGAACGATCGTAACGTTCATGATATTCGTAAGA
TTGTTCACACAGCCTCTGGCTCAATTGGCGCAGGCAGTTACTACCCTCCAGAGAACAGCGGCCGCAAGCGAGCGCGTGTT
CACCTTCCTTGAAGTAGAAGAGATGGAGGATGAAAGCCAAAAAGTAAAGCGCCTGACCGGTGTGAAAGGACATGTGGAAT
TCAAGAATGTCAAGTTCGGATATGTTCCAGAAAAGACCGTCATCCATAACTTCTCGGCCGATGTCAAGGCCGGACAGAAG
ATAGCCATTGTGGGTCCGACAGGCGCGGGAAAGACCACATTGGTCAACCTTCTGATGCGGTTCTATGAGGTAGACGGCGG
AGAGATATTGATCGATGGCGTACCTACTTCGGAGGTCCCTCGCGAAGACGTGCATAATCAATTCGGCATGGTCCTGCAGG
ACACCTGGTTATTTGAAGGCACCATCAAGGAGAACATCATCTATTCGGAAAAGAACATTACAGACGAACAAGTTGAGAAT
GCCTGCAAGACTGTAGGGCTGGATCACTTCATACAGACCCTCCCCGACAAGTACGACACGGTTCTCAATGAATCAATGAG
CCTCTCCGAGGGCCAAAAACAACTGCTGACGATCGCGCGTGCGATCATCAAGGACTCGCCTCTGCTGATATTGGACGAGG
CGACGAGTTCGGTCGACACGCGTACCGAACGCATAGTTCAGGCAGCAATGGATAAGTTGACCGTGGGCAGAACTTCATTC
GTCATCGCACACAGATTGTCGACGATAAAGAACGCCGACAAGATCCTGGTTATAAGGGATGGGGATGTCGTCGAAAGCGG
CAGTCACGATCAGCTGCTTGCAAAGAACGGCTTCTATGCCGGACTTTACAACAGCCAATTCGAAGGATGCGACGGATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(389-536)

ABC transporter transmembrane region (ABC_membrane)

(44-326)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A7LE80

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

54.905

94.935

0.521

Multiple sequence alignment