Detailed information NTG0133729

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: AMM49_RS01905
• Genome accession: NZ_CP012480
• Coordinates: 329828..332218 (+)
• Length: 796 a.a.
• NCBI ID: WP_000101518.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain NGBS128
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 324828..337218

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AMM49_RS01875 (AMM49_01865)	-	325453..326193 (+)	741	WP_001217940.1	ABC transporter permease	-
AMM49_RS01880 (AMM49_01870)	-	326190..327275 (+)	1086	WP_000791335.1	sensor histidine kinase	-
AMM49_RS01885 (AMM49_01875)	-	327277..327867 (+)	591	WP_000772044.1	response regulator transcription factor	-
AMM49_RS01890 (AMM49_01880)	-	327917..328621 (+)	705	WP_001168927.1	TMEM175 family protein	-
AMM49_RS01895 (AMM49_01885)	gmk	328788..329417 (+)	630	WP_000003861.1	guanylate kinase	-
AMM49_RS01900 (AMM49_01890)	rpoZ	329440..329754 (+)	315	WP_000979239.1	DNA-directed RNA polymerase subunit omega	-
AMM49_RS01905 (AMM49_01895)	priA	329828..332218 (+)	2391	WP_000101518.1	primosomal protein N'	Machinery gene
AMM49_RS01910 (AMM49_01900)	fmt	332265..333200 (+)	936	WP_000163893.1	methionyl-tRNA formyltransferase	-
AMM49_RS01915 (AMM49_01905)	rsmB	333190..334512 (+)	1323	WP_001262601.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
AMM49_RS01920 (AMM49_01910)	-	334550..335287 (+)	738	WP_000406233.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	-

Sequence

Protein

• Length: 796 a.a.
• Molecular weight: 91050.79 Da
• Isoelectric Point: 8.8865

>NTDB_id=133729 AMM49_RS01905 WP_000101518.1 329828..332218(+) (priA) [Streptococcus agalactiae strain NGBS128]
MARKLAQVIVDIPLMQTDKPFSYAIPKDLEDLVQVGARVHVPFGRGNRLLQGFVVGFRDDDELETKDIAGVLDFEPVLNQ
EQLDLADQMRHTVFSYKISILKSMLPSLLNSQYDKLLLATDTLPSEDREDLFGHKTEIVFSSLSSQDAKKAGRLIQKGFI
EVQYLAKDKKTIKTEKIYKINRTLLEESQIAARAKKRLELKEFLLENPQPGRLTALNKQFSSPVVNFFREEGIIEVIEKE
ASRSDNYFKGILKTDFLDLNQEQAKVVKIVVDRIGKDQNKPFLLEGITGSGKTEVYLHVIDNVLKLGKTAIVLVPEISLT
PQMTNRFISRFGKRVAIMHSGLSDGEKFDEWRKIKSGQAKVVVGARSAIFAPLENIGAIIIDEEHESTYKQESNPRYHAR
DVALLRAEYHKAVLLMGSATPSIESRARASRDVYKFLELKHRANPKARIPQVEIIDFRNFIGQQEVSNFTPYLLDKIRDR
LDKKEQVVLMLNRRGYSSFIMCRNCGYVDQCPNCDISLTLHMATKTMNCHYCGFEKPIPRTCPNCNSKSISYYGTGTQKA
YEELLKVIPDAKILRMDVDTTRQKGGHESILKRFGNHEADILLGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRSSERT
FQLLTQVAGRAGRAEKEGEVVIQTYNPNHYAIQLAQKQDFEAFYQYEMNIRRQLGYPPYYFTVGLTLSHKDEEWLIRKSY
EVLSLLKQGFSDKVKLLGPTPKPIARTHNLYHYQIIIKYRFEDNLELVLNRLLDITQDKENRDLRLAIDHEPQNMM

Nucleotide

• Length: 2391 bp

>NTDB_id=133729 AMM49_RS01905 WP_000101518.1 329828..332218(+) (priA) [Streptococcus agalactiae strain NGBS128]
ATGGCAAGAAAATTAGCACAGGTTATTGTTGATATTCCTCTGATGCAGACAGATAAACCATTTTCGTATGCCATTCCTAA
AGATTTGGAAGATTTGGTACAAGTAGGAGCACGCGTTCATGTTCCTTTTGGAAGAGGGAATCGTCTTTTGCAAGGCTTTG
TTGTCGGTTTCAGAGATGATGATGAATTAGAGACTAAGGATATTGCGGGGGTCCTAGATTTTGAACCTGTTTTAAATCAG
GAACAACTAGACTTAGCTGATCAGATGCGCCATACTGTCTTTTCTTATAAAATATCTATTTTGAAATCAATGTTACCAAG
TCTTTTGAATTCGCAATATGATAAACTCTTGTTAGCAACAGACACATTACCATCAGAAGATAGAGAAGATCTATTTGGTC
ATAAAACGGAAATTGTCTTTTCAAGTTTGTCTTCTCAAGATGCCAAAAAAGCAGGCAGATTAATTCAAAAAGGTTTCATA
GAAGTTCAATATTTAGCCAAAGATAAGAAAACAATAAAAACAGAAAAGATTTACAAAATCAACAGAACTCTGTTAGAAGA
GAGTCAAATAGCAGCAAGAGCGAAAAAGAGACTGGAGTTGAAAGAATTCCTGTTAGAAAATCCTCAACCAGGGCGCCTCA
CAGCTTTAAACAAACAATTTTCATCTCCTGTAGTTAATTTTTTCAGAGAAGAAGGAATCATTGAGGTCATTGAAAAAGAA
GCTAGTAGATCTGATAATTATTTTAAAGGAATCCTAAAAACGGATTTTTTGGATTTAAATCAGGAACAAGCTAAAGTAGT
TAAAATAGTTGTTGACCGAATTGGTAAGGATCAGAATAAACCCTTCTTGTTGGAGGGGATTACAGGGTCTGGTAAGACAG
AGGTATATCTTCATGTCATTGATAACGTTTTAAAGTTGGGAAAAACAGCGATTGTTCTCGTTCCAGAAATTTCTTTAACT
CCCCAGATGACGAATCGTTTTATTTCCCGTTTTGGAAAGCGAGTTGCTATTATGCACTCGGGCTTGTCAGATGGTGAAAA
ATTTGATGAGTGGCGAAAGATAAAATCAGGTCAAGCTAAAGTTGTCGTTGGAGCTCGTTCAGCAATTTTTGCTCCTTTGG
AAAATATCGGAGCCATCATTATAGATGAAGAACATGAATCAACTTATAAGCAAGAATCTAACCCAAGGTATCATGCGCGC
GATGTGGCCTTGCTACGTGCAGAATATCATAAAGCTGTGTTACTAATGGGATCAGCAACTCCAAGTATCGAAAGCCGAGC
TAGAGCTAGTCGGGATGTTTATAAATTTTTAGAATTAAAACATCGTGCTAATCCTAAAGCACGTATTCCTCAGGTTGAAA
TTATTGATTTTAGAAATTTTATTGGTCAACAAGAAGTTAGTAATTTCACACCATATTTACTAGATAAAATCCGAGATAGA
TTAGATAAGAAAGAGCAAGTGGTTCTTATGCTCAATCGTAGAGGTTATTCTAGTTTTATTATGTGTCGAAACTGCGGCTA
CGTTGATCAATGTCCTAATTGTGACATTTCTCTGACTTTACATATGGCTACAAAGACCATGAATTGTCATTATTGTGGGT
TTGAAAAGCCTATTCCAAGAACATGTCCAAATTGCAATAGTAAAAGTATCTCTTACTATGGTACTGGAACCCAAAAAGCT
TATGAAGAACTTTTGAAAGTTATCCCAGACGCAAAGATTTTACGGATGGATGTTGATACGACAAGGCAAAAAGGCGGTCA
TGAGTCTATTTTGAAGCGTTTCGGAAATCATGAAGCTGATATTTTATTGGGAACACAGATGATTGCTAAGGGATTGGATT
TTCCAAATGTTACTTTAGTTGGAGTACTAAATGCAGATACTTCTCTGAATTTACCTGATTTTCGATCATCAGAGCGAACT
TTTCAGCTATTAACTCAAGTGGCTGGACGTGCTGGGCGTGCTGAAAAAGAAGGAGAGGTTGTCATTCAAACTTATAATCC
TAATCATTATGCTATTCAATTAGCCCAAAAGCAAGATTTTGAAGCTTTTTATCAATATGAAATGAATATCCGTCGACAAC
TTGGTTATCCTCCTTATTATTTTACAGTTGGTTTAACATTATCGCATAAAGATGAAGAGTGGTTAATACGAAAATCTTAT
GAAGTATTAAGTTTATTGAAGCAAGGCTTTAGTGATAAAGTAAAGTTGTTAGGTCCAACGCCAAAACCAATTGCAAGAAC
ACATAACCTTTATCACTACCAAATTATTATCAAGTATCGATTTGAGGACAACCTTGAACTTGTTTTGAATCGCTTATTAG
ACATCACTCAAGACAAGGAGAATAGAGATCTTCGCTTAGCAATAGACCACGAACCGCAAAATATGATGTAG

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (258-422)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (7-106)

• Primosomal protein N C-terminal domain (PriA_C) (698-792)

• Helicase conserved C-terminal domain (Helicase_C) (571-654)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (511-537)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Bacillus subtilis subsp. subtilis str. 168	46.658	100	0.474