Detailed information NTG0131007

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: HKU488_RS03810
• Genome accession: NZ_CP012045
• Coordinates: 753137..755347 (+)
• Length: 736 a.a.
• NCBI ID: WP_002990110.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain HKU488
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 748137..760347

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HKU488_RS09950 (HKU488_00631)	-	748284..748460 (-)	177	WP_002984898.1	DUF3042 family protein	-
HKU488_RS03785 (HKU488_00632)	miaA	748594..749493 (+)	900	WP_010922190.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
HKU488_RS03790 (HKU488_00633)	hflX	749566..750804 (+)	1239	WP_010922191.1	GTPase HflX	-
HKU488_RS03795 (HKU488_00634)	-	750797..751432 (+)	636	WP_002990114.1	cystathionine beta-lyase	-
HKU488_RS03800 (HKU488_00635)	rnz	751447..752376 (+)	930	WP_002984894.1	ribonuclease Z	-
HKU488_RS03805 (HKU488_00636)	-	752376..753140 (+)	765	WP_002984893.1	SDR family NAD(P)-dependent oxidoreductase	-
HKU488_RS03810 (HKU488_00637)	recJ	753137..755347 (+)	2211	WP_002990110.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
HKU488_RS03815 (HKU488_00638)	-	755498..756016 (+)	519	WP_002990109.1	adenine phosphoribosyltransferase	-
HKU488_RS03820 (HKU488_00639)	-	756097..756780 (+)	684	WP_010922192.1	DnaD domain-containing protein	-
HKU488_RS03825 (HKU488_00640)	nth	756777..757433 (+)	657	WP_010922193.1	endonuclease III	-
HKU488_RS03830 (HKU488_00641)	-	757505..758191 (+)	687	WP_002990104.1	tRNA (adenine(22)-N(1))-methyltransferase	-
HKU488_RS03835 (HKU488_00642)	-	758181..758969 (+)	789	WP_002984887.1	Nif3-like dinuclear metal center hexameric protein	-
HKU488_RS03840 (HKU488_00643)	-	759009..760115 (+)	1107	WP_011285493.1	NAD(P)/FAD-dependent oxidoreductase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 82565.42 Da
• Isoelectric Point: 4.7844

>NTDB_id=131007 HKU488_RS03810 WP_002990110.1 753137..755347(+) (recJ) [Streptococcus pyogenes strain HKU488]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYDRGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLTGFDDQEAQAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNG
KRELFTAFGGHAGAAGMTLPVDNLEALSDFLCQFVIERGLDQTAKNTLTIDERLSLDDLSLDILKSLDKLAPYGMDHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLSVNHWNGNTSLQFMLVDARVD
GVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFKTWRNQFVHKDFDAIYFKNQMKHPYYLTGFGSREQFAKLYK
TIYQFPEFDLRHKLTELSHYLNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ

Nucleotide

• Length: 2211 bp

>NTDB_id=131007 HKU488_RS03810 WP_002990110.1 753137..755347(+) (recJ) [Streptococcus pyogenes strain HKU488]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTATGATCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTTATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCATCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGCAGGAGTTGATGTCCTTGTCTCCTAT
TGATTTGGAACATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGGCGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGACGGGCTTTGATGACCAAGAAGCTCAAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAGGCCTTAGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCTGTTCAAGTCTT
GGCACAAGCTGGCTGGCATCCTGGTGTTCTTGGGATTGTCGCTGGTCGTATCATGGAAACTATTGGACAAACGGTCGTCG
TTTTGACCATTGATAATGGCTTTGCAAAAGGCTCGGCCAGAAGTTTAGAAGCTATTAATATTTTTGAAGCCTTAAATGGC
AAGCGTGAGTTATTTACAGCCTTTGGGGGACATGCTGGTGCAGCAGGAATGACCCTGCCCGTTGACAACTTGGAAGCTCT
TTCAGACTTTCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCCAAAAATACGTTAACTATTGATGAAAGAC
TGTCTTTGGACGACCTTAGCCTTGATATTTTAAAGAGTTTAGATAAATTAGCCCCTTATGGGATGGATCATCAAAAGCCG
GTCTTTTATGTCAAGGACATAAGGGTTAGTCAAGCGCGTACCATAGGGCAAGACCAGAGCCATCTTAAATTTAAAGTCAG
TCAGGGCAAAGCTTCCTTTGACGTACTGGCTTTTGGTCAAGGAAGTCAACTGCAAGAGTTCCGACAAGCTACTGGTTTAG
AATTAGCAGTTACCTTATCTGTCAACCATTGGAATGGGAACACGAGTCTCCAATTCATGTTAGTAGATGCTCGTGTTGAC
GGAGTGCAACTTCTTGACTTAAGGACAAAAACAGCCAAAGTTCCTGAAGGTATTCCGACTATTGAAGAAGACCCAAATGC
CAGAGTCATTCTGATTAATGACATCCCTGAAGATTTCAAAACCTGGCGCAACCAGTTTGTTCACAAGGATTTTGACGCCA
TCTATTTTAAAAATCAGATGAAACATCCTTATTATTTAACAGGATTTGGCAGCAGAGAGCAGTTTGCCAAGCTCTACAAA
ACCATCTATCAGTTTCCTGAATTTGATTTACGACATAAATTGACAGAGTTGAGTCACTATTTAAACATAGAAAAACTTTT
ACTGATTAAGTTGATTCAAATTTTTGAAGAGTTGTCTTTTGTGACGATTGACGATGGGCTGATGACGGTTAACCCCCAAG
CGCAAAAACGAGAGATTTCAGAGAGCCACATTTACCAAGACTTAAAAGAATTGGTGAAATTTCAAGAAATCATGGCTTTG
GCTAGCCCGAAAGAGATGTATGATTATTTGGTGAAATCAAACGATCAATAA

Domains

Predicted by InterProScan.

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (588-729)

• DHHA1 domain (DHHA1) (317-435)

• RecJ OB domain (RecJ_OB) (450-556)

• DHH family (DHH) (83-228)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	63.008	100	0.632
recJ	Bacillus subtilis subsp. subtilis str. 168	34.866	100	0.371