Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BF32_RS09670 | Genome accession | NZ_CP009600 |
| Coordinates | 1786593..1787636 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013200.1 | Uniprot ID | A0AA96SWA8 |
| Organism | Bacillus thuringiensis strain HD571 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1781593..1792636
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BF32_RS09625 (BF32_1831) | - | 1782020..1782220 (-) | 201 | WP_000106084.1 | YqzE family protein | - |
| BF32_RS09630 (BF32_1832) | aroK | 1782259..1782756 (-) | 498 | WP_000836631.1 | shikimate kinase AroK | - |
| BF32_RS09635 (BF32_1833) | - | 1782877..1783527 (-) | 651 | WP_000183850.1 | 2OG-Fe(II) oxygenase | - |
| BF32_RS09640 (BF32_1834) | comGG | 1783703..1784074 (-) | 372 | WP_001231191.1 | competence type IV pilus minor pilin ComGG | - |
| BF32_RS09645 (BF32_1835) | comGF | 1784071..1784541 (-) | 471 | WP_000923089.1 | competence type IV pilus minor pilin ComGF | - |
| BF32_RS09650 (BF32_1836) | comGE | 1784511..1784813 (-) | 303 | WP_000829458.1 | competence type IV pilus minor pilin ComGE | - |
| BF32_RS09655 (BF32_1837) | comGD | 1784806..1785261 (-) | 456 | WP_000810393.1 | comG operon protein ComGD | - |
| BF32_RS09660 (BF32_1838) | comGC | 1785258..1785557 (-) | 300 | WP_001178696.1 | comG operon protein ComGC | - |
| BF32_RS09665 (BF32_1839) | comGB | 1785569..1786600 (-) | 1032 | WP_000471911.1 | comG operon protein ComGB | - |
| BF32_RS09670 (BF32_1840) | comGA | 1786593..1787636 (-) | 1044 | WP_001013200.1 | competence protein ComGA | Machinery gene |
| BF32_RS09675 (BF32_1841) | - | 1787842..1788537 (+) | 696 | WP_000434117.1 | helix-turn-helix transcriptional regulator | - |
| BF32_RS09680 (BF32_1842) | - | 1788663..1788905 (+) | 243 | WP_000440711.1 | DUF2626 domain-containing protein | - |
| BF32_RS09685 (BF32_1843) | - | 1789013..1790407 (+) | 1395 | WP_001094329.1 | L-cystine transporter | - |
| BF32_RS09690 (BF32_1844) | - | 1790624..1790839 (-) | 216 | WP_001008320.1 | DUF3912 family protein | - |
| BF32_RS09695 (BF32_1845) | - | 1791093..1791404 (+) | 312 | WP_001093243.1 | hypothetical protein | - |
| BF32_RS09700 (BF32_1846) | - | 1791441..1791929 (-) | 489 | WP_000764279.1 | hypothetical protein | - |
| BF32_RS09705 (BF32_1847) | - | 1792009..1792383 (-) | 375 | WP_001012350.1 | nucleoside 2-deoxyribosyltransferase | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39412.97 Da Isoelectric Point: 9.2147
>NTDB_id=130549 BF32_RS09670 WP_001013200.1 1786593..1787636(-) (comGA) [Bacillus thuringiensis strain HD571]
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
MNGIESFANMILKEACRVQASDLHIVPRQKDVVVQLRIGKDLMTKYCIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDARGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTLCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLQSSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=130549 BF32_RS09670 WP_001013200.1 1786593..1787636(-) (comGA) [Bacillus thuringiensis strain HD571]
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATATGATTTTGAAAGAAGCGTGCAGGGTACAAGCGTCGGACTTACATATTGTGCC
CCGGCAGAAGGATGTAGTGGTTCAGCTGCGTATAGGAAAAGATTTAATGACGAAATATTGTATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCTATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAAGAAGTGTATTTGCGTCTTTCCACGCTTCCAACCGTATACCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
GTTATTCTCATGGATTACTCGTATTTACTGGACCGACTGGTTCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCTGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTCG
GTGAAATTCGTGATGAAGAAACAGCGAAAATTGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACATTGCAT
ACGAATGATGCGAGAGGGGCGATACTTCGGTTCATGGATTTTGGCATAACGAGGCAAGAAATCGAACAATCTTTATTAGC
TATAGCTGCACAGCGACTTGTCGAATTAAAGTGTCCGTTTTGCAAAAGAAAGTGCTCAACTTTATGCAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACATACAAGCACGAAACATTACAATCTTCGATACGAAAAGGATACGCTTTAGGGTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
57.925 |
100 |
0.579 |
| pilB | Vibrio campbellii strain DS40M4 |
35.977 |
100 |
0.366 |