Detailed information NTG0129331

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: FORC16_RS05510
• Genome accession: NZ_CP011775
• Coordinates: 1177731..1179080 (+)
• Length: 449 a.a.
• NCBI ID: WP_060532019.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_016
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1172731..1184080

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC16_RS05495 (FORC16_1056)	lrp	1173459..1173953 (+)	495	WP_011080767.1	leucine-responsive transcriptional regulator Lrp	-
FORC16_RS05500 (FORC16_1057)	-	1174098..1177055 (+)	2958	WP_060532023.1	DNA translocase FtsK	-
FORC16_RS05505 (FORC16_1058)	lolA	1177128..1177724 (+)	597	WP_060532021.1	outer membrane lipoprotein chaperone LolA	-
FORC16_RS05510 (FORC16_1059)	rarA	1177731..1179080 (+)	1350	WP_060532019.1	replication-associated recombination protein A	Machinery gene
FORC16_RS05515 (FORC16_1060)	serS	1179172..1180479 (+)	1308	WP_011080763.1	serine--tRNA ligase	-
FORC16_RS05520 (FORC16_1061)	bioA	1180540..1181817 (-)	1278	WP_060532017.1	adenosylmethionine--8-amino-7-oxononanoate transaminase	-
FORC16_RS05525 (FORC16_1062)	bioB	1181958..1183010 (+)	1053	WP_011080761.1	biotin synthase BioB	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 49706.02 Da
• Isoelectric Point: 5.6773

>NTDB_id=129331 FORC16_RS05510 WP_060532019.1 1177731..1179080(+) (rarA) [Vibrio vulnificus strain FORC_016]
MSNYTLDFSGDEDFRPLAARMRPETVEQYIGQQHILGPGKPLRRALEAGHIHSMILWGPPGTGKTTLAEVAANYANAEVE
RVSAVTSGVKDIRAAIEKARENKMAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFELNNALLSRARV
YKLTSLNKEEISLALNQAINDKQRGLGNTPAHFADNVLDRLAELVNGDARMSLNYLELLYDMAEDNAQGEKEITLKLLAE
VAGEKVSRFDNKGDIWYDLISAVHKSIRGSNPDAALYWSARMIAAGCDPLYIARRLLAIASEDVGNADPRAMQVALSAWD
CFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAWKQALSDAHNLPEFEVPFHLRNAPTGLMKDLGYGEGYRYAHDEPGAY
AAGEQYLPAEIADRKYYQPTNRGLESKIAEKLDYLANLDANSPQKRYEK

Nucleotide

• Length: 1350 bp

>NTDB_id=129331 FORC16_RS05510 WP_060532019.1 1177731..1179080(+) (rarA) [Vibrio vulnificus strain FORC_016]
GTGTCAAATTACACCTTAGATTTTTCAGGGGACGAAGATTTTCGTCCCCTTGCTGCTCGTATGAGACCGGAAACGGTCGA
ACAGTACATCGGTCAGCAGCATATTTTAGGCCCTGGTAAGCCATTACGTCGCGCGCTAGAGGCCGGCCACATTCATTCAA
TGATTCTGTGGGGACCTCCAGGTACAGGCAAGACGACATTAGCGGAAGTAGCCGCAAACTACGCCAATGCGGAAGTTGAA
CGCGTCTCTGCGGTCACGTCCGGCGTGAAAGACATTCGGGCCGCAATTGAAAAAGCACGTGAGAACAAAATGGCGGGTCG
TCGCACCATCTTGTTTGTGGATGAGGTACATCGCTTTAATAAATCACAGCAAGATGCCTTCTTACCGCACATTGAAGATG
GAACAGTGACTTTTATCGGCGCGACCACAGAAAATCCATCGTTTGAACTGAACAACGCATTATTGTCACGTGCTCGTGTG
TATAAGCTTACGTCACTCAACAAAGAAGAAATCTCACTGGCATTAAACCAAGCGATCAACGATAAACAACGTGGTCTGGG
TAATACACCAGCACACTTTGCTGATAATGTCTTGGATCGTCTGGCTGAGCTCGTCAATGGTGATGCGCGAATGTCTCTTA
ACTATCTTGAGCTGCTGTATGACATGGCAGAAGACAATGCTCAGGGTGAAAAAGAGATCACGCTAAAGCTATTGGCGGAA
GTGGCGGGGGAGAAGGTCTCTCGTTTTGATAATAAAGGCGACATTTGGTACGACTTAATCTCTGCCGTGCACAAATCCAT
TCGCGGCTCAAACCCGGACGCTGCGCTTTATTGGTCGGCGAGAATGATCGCTGCCGGTTGTGATCCACTCTATATCGCGC
GACGTTTGCTGGCCATTGCCTCTGAAGATGTGGGCAATGCGGATCCGAGGGCAATGCAAGTGGCACTTTCCGCGTGGGAT
TGCTTTACCCGTGTTGGACCCGCAGAAGGCGAACGCGCAATTGCACAGGCGATCGTTTACCTTGCGTGCGCGCCGAAAAG
TAACGCGGTCTACACCGCTTGGAAGCAAGCGCTGTCGGATGCACATAATCTTCCTGAATTTGAAGTGCCTTTCCATTTGC
GTAATGCACCGACCGGATTGATGAAAGATCTCGGTTATGGAGAAGGTTATCGATACGCTCATGATGAACCAGGGGCCTAC
GCAGCAGGCGAACAATATTTGCCTGCTGAAATTGCTGATCGCAAGTACTATCAGCCAACAAATCGAGGCTTAGAGAGCAA
AATCGCTGAAAAGTTAGATTACTTGGCTAATTTAGACGCAAATAGCCCACAAAAGCGCTATGAAAAGTAG

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (54-159)

• MgsA AAA+ ATPase C terminal (MgsA_C) (269-435)

• AAA C-terminal domain (AAA_assoc_2) (189-268)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	40.189	94.209	0.379