Detailed information NTG0129141

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: M444_RS07890
• Genome accession: NZ_CP011664
• Coordinates: 1915694..1917049 (-)
• Length: 451 a.a.
• NCBI ID: WP_008740456.1
• Uniprot ID: A0ABZ1RSK3
• Organism: Streptomyces sp. Mg1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1910694..1922049

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M444_RS07870 (M444_07855)	-	1911018..1913255 (+)	2238	WP_037797217.1	AAA family ATPase	-
M444_RS07875 (M444_07860)	rpsD	1913312..1913923 (-)	612	WP_008740451.1	30S ribosomal protein S4	-
M444_RS07880 (M444_07865)	-	1913979..1914845 (+)	867	Protein_1610	DUF2470 domain-containing protein	-
M444_RS07885 (M444_07870)	-	1914923..1915609 (-)	687	WP_008740454.1	HNH endonuclease family protein	-
M444_RS07890 (M444_07875)	rarA	1915694..1917049 (-)	1356	WP_008740456.1	replication-associated recombination protein A	Machinery gene
M444_RS07895 (M444_07880)	-	1917091..1917705 (-)	615	WP_008740458.1	vitamin K epoxide reductase family protein	-
M444_RS07900 (M444_07885)	hisS	1917857..1919116 (-)	1260	WP_008740460.1	histidine--tRNA ligase	-
M444_RS07905 (M444_07890)	-	1919127..1919837 (-)	711	WP_008740462.1	MBL fold metallo-hydrolase	-
M444_RS07910 (M444_07895)	-	1920002..1920748 (+)	747	WP_008740464.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 47802.29 Da
• Isoelectric Point: 6.1043

>NTDB_id=129141 M444_RS07890 WP_008740456.1 1915694..1917049(-) (rarA) [Streptomyces sp. Mg1]
MEPDLFTAAAEERREKDPTSAPLAARMRPRTLDEVVGQQHLLKPGSPLRRLVGEGAGGPAGASSVILWGPPGIGKTTLAY
VVSQATQKRFVELSAITAGVKEVRAVIEGAKRAAGGYGKETVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SIISPLLSRSLLLTLESLTDEDLSALMRRALEEERGLGGAVTLPADAEAHLLRIAGGDARRALTALEAGAGSAIAKGEAE
ISLQTLEEAVDRAAVTYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPTAL
PIAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNTATTAIGAALADVRAGLAGAVPTHLRDGHYKGAAKLGHAVGYVY
PHDVPGGIAAQQYAPDEIHGKRYYEPTRYGAEARYADVVEKVRERLRTDHP

Nucleotide

• Length: 1356 bp

>NTDB_id=129141 M444_RS07890 WP_008740456.1 1915694..1917049(-) (rarA) [Streptomyces sp. Mg1]
GTGGAACCAGACCTGTTCACCGCCGCCGCCGAAGAACGCCGGGAGAAGGACCCCACGAGCGCACCGCTCGCCGCCCGGAT
GCGCCCCCGCACCCTGGACGAGGTCGTCGGCCAGCAACACCTGCTGAAGCCCGGATCGCCGCTGCGCCGGCTCGTCGGGG
AGGGCGCGGGCGGGCCCGCCGGGGCCTCCTCGGTGATCCTGTGGGGGCCCCCGGGCATCGGCAAGACCACCCTCGCGTAC
GTGGTGAGCCAGGCGACGCAGAAGCGGTTCGTCGAGCTCTCGGCCATCACCGCGGGCGTGAAGGAGGTACGCGCCGTCAT
CGAGGGCGCGAAGCGGGCGGCCGGCGGGTACGGCAAGGAGACCGTCCTCTTCCTGGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCGCTGCTGCCGGCCGTCGAGAACCGGTGGGTCACGCTGATCGCGGCGACCACCGAGAACCCGTACTTC
TCGATCATCTCGCCGCTGCTGTCCCGCTCGCTGCTGCTCACGCTGGAATCCCTGACGGACGAGGACCTGAGCGCGCTGAT
GCGGCGCGCCCTGGAGGAGGAGCGCGGGCTCGGCGGGGCGGTGACCCTGCCGGCGGACGCGGAGGCGCACCTGCTGCGGA
TCGCGGGCGGTGACGCGCGGCGGGCGCTGACGGCGCTGGAGGCGGGGGCCGGATCGGCGATCGCCAAGGGGGAGGCGGAG
ATCAGCCTCCAGACGCTGGAGGAGGCGGTCGACCGGGCGGCGGTCACCTACGACCGGGACGGCGACCAGCACTACGACGT
GGCGAGCGCCCTGATCAAGTCGATCCGGGGCTCCGACGTGGACGCGGCGCTGCACTACCTGGCGCGGATGATCGAGGCGG
GGGAGGACCCCCGGTTCATCGCGCGGCGCCTGATGATCTCGGCGAGCGAGGACATCGGGCTCGCGGACCCGACGGCCCTG
CCGATCGCCGTCGCTGCGGCGCAGGCGGTGGCGATGATCGGCTTCCCCGAGGCGGCGCTGACCCTGTCGCACGCGACGAT
CGCCCTGGCGCTCGCCCCGAAGTCGAACACGGCGACGACCGCGATCGGCGCGGCCCTGGCCGACGTCCGGGCGGGACTGG
CCGGGGCCGTGCCGACGCACCTGCGGGACGGGCACTACAAGGGAGCGGCCAAGCTGGGTCACGCGGTGGGCTACGTGTAC
CCGCACGACGTGCCGGGCGGCATCGCCGCGCAGCAGTACGCGCCGGACGAGATCCACGGGAAGCGCTACTACGAGCCGAC
GCGGTACGGCGCGGAGGCGCGGTACGCGGACGTCGTCGAAAAGGTCCGCGAGCGCCTGCGCACCGACCACCCCTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (200-276)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	45.921	95.122	0.437