Detailed information
Bioinformatically predicted
Overview
| Name | codY | Type | Regulator |
| Locus tag | BG02_RS06180 | Genome accession | NZ_CP009341 |
| Coordinates | 942245..943024 (-) | Length | 259 a.a. |
| NCBI ID | WP_000421288.1 | Uniprot ID | Q81WK7 |
| Organism | Bacillus anthracis strain Ohio ACB | ||
| Function | repression of comK (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 907923..981846 | 942245..943024 | within | 0 |
Gene organization within MGE regions
Location: 907923..981846
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG02_RS06025 (BG02_945) | - | 908267..909937 (-) | 1671 | WP_000823085.1 | ribonuclease J | - |
| BG02_RS06035 (BG02_946) | dapA | 910703..911581 (-) | 879 | WP_000564761.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| BG02_RS06040 (BG02_947) | dapG | 911593..912825 (-) | 1233 | WP_000692470.1 | aspartate kinase | - |
| BG02_RS06045 (BG02_948) | asd | 912849..913895 (-) | 1047 | WP_000414849.1 | aspartate-semialdehyde dehydrogenase | - |
| BG02_RS06050 (BG02_949) | dpaB | 914046..914645 (-) | 600 | WP_001049484.1 | dipicolinate synthase subunit B | - |
| BG02_RS06055 (BG02_950) | dpaA | 914642..915544 (-) | 903 | WP_000954726.1 | dipicolinic acid synthetase subunit A | - |
| BG02_RS06060 (BG02_951) | - | 915819..916070 (-) | 252 | WP_001239752.1 | YlmC/YmxH family sporulation protein | - |
| BG02_RS06065 (BG02_952) | - | 916197..917438 (-) | 1242 | WP_000592993.1 | M16 family metallopeptidase | - |
| BG02_RS06070 (BG02_953) | - | 917525..918424 (-) | 900 | WP_000647529.1 | polysaccharide deacetylase family protein | - |
| BG02_RS06075 (BG02_954) | pnp | 918576..920714 (-) | 2139 | WP_000076733.1 | polyribonucleotide nucleotidyltransferase | - |
| BG02_RS06080 (BG02_955) | rpsO | 920875..921144 (-) | 270 | WP_001229392.1 | 30S ribosomal protein S15 | - |
| BG02_RS06085 (BG02_956) | ribF | 921245..922216 (-) | 972 | WP_000766711.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| BG02_RS06090 (BG02_957) | truB | 922260..923183 (-) | 924 | WP_000399357.1 | tRNA pseudouridine(55) synthase TruB | - |
| BG02_RS06095 (BG02_958) | rbfA | 923270..923626 (-) | 357 | WP_000776446.1 | 30S ribosome-binding factor RbfA | - |
| BG02_RS06100 (BG02_959) | - | 923642..923923 (-) | 282 | WP_000582364.1 | DUF503 domain-containing protein | - |
| BG02_RS06105 (BG02_960) | infB | 923920..925980 (-) | 2061 | WP_000036339.1 | translation initiation factor IF-2 | - |
| BG02_RS06110 (BG02_961) | - | 925985..926296 (-) | 312 | WP_001286523.1 | YlxQ family RNA-binding protein | - |
| BG02_RS06115 (BG02_962) | rnpM | 926297..926569 (-) | 273 | WP_000071128.1 | RNase P modulator RnpM | - |
| BG02_RS06120 (BG02_963) | nusA | 926581..927687 (-) | 1107 | WP_000102609.1 | transcription termination factor NusA | - |
| BG02_RS06125 (BG02_964) | rimP | 927705..928175 (-) | 471 | WP_000359097.1 | ribosome maturation factor RimP | - |
| BG02_RS06130 (BG02_965) | - | 928508..932809 (-) | 4302 | WP_000059985.1 | PolC-type DNA polymerase III | - |
| BG02_RS06135 (BG02_966) | - | 932934..934634 (-) | 1701 | WP_042514170.1 | proline--tRNA ligase | - |
| BG02_RS06140 (BG02_967) | rseP | 934744..936000 (-) | 1257 | WP_001090228.1 | RIP metalloprotease RseP | - |
| BG02_RS06145 (BG02_968) | dxr | 936017..937159 (-) | 1143 | WP_000790359.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| BG02_RS06150 (BG02_969) | cdsA | 937183..937974 (-) | 792 | WP_000813581.1 | phosphatidate cytidylyltransferase | - |
| BG02_RS06155 (BG02_970) | uppS | 937992..938768 (-) | 777 | WP_000971303.1 | isoprenyl transferase | - |
| BG02_RS06160 (BG02_971) | frr | 938854..939411 (-) | 558 | WP_000531503.1 | ribosome recycling factor | - |
| BG02_RS06165 (BG02_972) | pyrH | 939414..940136 (-) | 723 | WP_000042663.1 | UMP kinase | - |
| BG02_RS06170 (BG02_973) | tsf | 940203..941090 (-) | 888 | WP_001018581.1 | translation elongation factor Ts | - |
| BG02_RS06175 (BG02_974) | rpsB | 941194..941895 (-) | 702 | WP_000111483.1 | 30S ribosomal protein S2 | - |
| BG02_RS06180 (BG02_975) | codY | 942245..943024 (-) | 780 | WP_000421288.1 | GTP-sensing pleiotropic transcriptional regulator CodY | Regulator |
| BG02_RS06185 (BG02_976) | hslU | 943102..944493 (-) | 1392 | WP_000550088.1 | ATP-dependent protease ATPase subunit HslU | - |
| BG02_RS06190 (BG02_977) | hslV | 944516..945058 (-) | 543 | WP_000526272.1 | ATP-dependent protease proteolytic subunit HslV | - |
| BG02_RS06195 (BG02_978) | xerC | 945101..946000 (-) | 900 | WP_001101226.1 | tyrosine recombinase XerC | - |
| BG02_RS06200 (BG02_979) | trmFO | 946066..947370 (-) | 1305 | WP_003161605.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| BG02_RS06205 (BG02_980) | topA | 947421..949499 (-) | 2079 | WP_001286969.1 | type I DNA topoisomerase | - |
| BG02_RS06210 (BG02_981) | dprA | 949644..950392 (-) | 749 | Protein_953 | DNA-processing protein DprA | - |
| BG02_RS06215 (BG02_982) | sucD | 950600..951502 (-) | 903 | WP_000115178.1 | succinate--CoA ligase subunit alpha | - |
| BG02_RS06220 (BG02_983) | sucC | 951523..952683 (-) | 1161 | WP_001020786.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| BG02_RS06225 (BG02_984) | rnhB | 952877..953650 (-) | 774 | WP_001174712.1 | ribonuclease HII | - |
| BG02_RS06230 (BG02_985) | ylqF | 953702..954592 (-) | 891 | WP_000236707.1 | ribosome biogenesis GTPase YlqF | - |
| BG02_RS06235 (BG02_986) | lepB | 954613..955164 (-) | 552 | WP_000711857.1 | signal peptidase I | - |
| BG02_RS06240 (BG02_987) | rplS | 955266..955610 (-) | 345 | WP_001186516.1 | 50S ribosomal protein L19 | - |
| BG02_RS06245 (BG02_988) | trmD | 955757..956491 (-) | 735 | WP_000686892.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| BG02_RS06250 (BG02_989) | rimM | 956491..957006 (-) | 516 | WP_000170269.1 | ribosome maturation factor RimM | - |
| BG02_RS06255 (BG02_990) | - | 957127..957354 (-) | 228 | WP_000737398.1 | KH domain-containing protein | - |
| BG02_RS06260 (BG02_991) | rpsP | 957369..957641 (-) | 273 | WP_000268750.1 | 30S ribosomal protein S16 | - |
| BG02_RS06265 (BG02_992) | ffh | 957742..959091 (-) | 1350 | WP_000863456.1 | signal recognition particle protein | - |
| BG02_RS06270 (BG02_993) | - | 959104..959436 (-) | 333 | WP_000891062.1 | putative DNA-binding protein | - |
| BG02_RS06275 (BG02_994) | ftsY | 959569..960558 (-) | 990 | WP_000007650.1 | signal recognition particle-docking protein FtsY | - |
| BG02_RS06280 (BG02_995) | smc | 960574..964143 (-) | 3570 | WP_000478985.1 | chromosome segregation protein SMC | - |
| BG02_RS06285 (BG02_996) | rncS | 964290..965027 (-) | 738 | WP_001146873.1 | ribonuclease III | - |
| BG02_RS06290 (BG02_997) | acpP | 965086..965319 (-) | 234 | WP_000786062.1 | acyl carrier protein | - |
| BG02_RS06295 (BG02_998) | fabG | 965389..966129 (-) | 741 | WP_000911782.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| BG02_RS06300 (BG02_999) | fabD | 966129..967073 (-) | 945 | WP_000516958.1 | ACP S-malonyltransferase | - |
| BG02_RS06305 (BG02_1000) | plsX | 967088..968080 (-) | 993 | WP_000684111.1 | phosphate acyltransferase PlsX | - |
| BG02_RS06310 (BG02_1001) | fapR | 968077..968670 (-) | 594 | WP_000747352.1 | transcription factor FapR | - |
| BG02_RS06315 (BG02_1002) | recG | 968759..970807 (-) | 2049 | WP_001006884.1 | ATP-dependent DNA helicase RecG | - |
| BG02_RS06320 (BG02_1003) | - | 971097..972773 (-) | 1677 | WP_000027136.1 | DAK2 domain-containing protein | - |
| BG02_RS06325 (BG02_1004) | - | 972796..973158 (-) | 363 | WP_000021109.1 | Asp23/Gls24 family envelope stress response protein | - |
| BG02_RS06330 (BG02_1005) | rpmB | 973537..973725 (+) | 189 | WP_000124778.1 | 50S ribosomal protein L28 | - |
| BG02_RS06335 | spoVM | 973798..973878 (-) | 81 | WP_001213599.1 | stage V sporulation protein SpoVM | - |
| BG02_RS06340 (BG02_1006) | - | 973945..974625 (-) | 681 | WP_042514171.1 | thiamine diphosphokinase | - |
| BG02_RS06345 (BG02_1007) | rpe | 974725..975369 (-) | 645 | WP_000589966.1 | ribulose-phosphate 3-epimerase | - |
| BG02_RS06350 (BG02_1008) | rsgA | 975372..976253 (-) | 882 | WP_001113935.1 | ribosome small subunit-dependent GTPase A | - |
| BG02_RS06355 (BG02_1009) | prkC | 976522..978495 (-) | 1974 | WP_000904759.1 | serine/threonine protein kinase PrkC | - |
| BG02_RS06360 (BG02_1010) | - | 978504..979256 (-) | 753 | WP_000648699.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| BG02_RS06365 (BG02_1011) | rlmN | 979261..980349 (-) | 1089 | WP_000450543.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| BG02_RS06370 (BG02_1012) | rsmB | 980354..981688 (-) | 1335 | WP_001249680.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
Sequence
Protein
Download Length: 259 a.a. Molecular weight: 28774.05 Da Isoelectric Point: 4.7947
>NTDB_id=128724 BG02_RS06180 WP_000421288.1 942245..943024(-) (codY) [Bacillus anthracis strain Ohio ACB]
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
MELLAKTRKLNALLQSAAGKPVNFREMSDTMCEVIEANVFVVSRRGKLLGYAIHQQIENERMKQMLAERQFPEEYTQSLF
NITETSSNLDVNSAYTAFPVENKELFGQGLTTIVPIVGGGERLGTLVLARLGQEFLDDDLILAEYSSTVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELNGTEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNDKFLHELAKLKTN
Nucleotide
Download Length: 780 bp
>NTDB_id=128724 BG02_RS06180 WP_000421288.1 942245..943024(-) (codY) [Bacillus anthracis strain Ohio ACB]
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
ATGGAATTATTAGCAAAAACAAGAAAATTAAATGCGTTATTACAGAGCGCAGCAGGAAAGCCTGTAAACTTTAGAGAAAT
GTCTGACACAATGTGTGAAGTAATCGAAGCGAACGTATTCGTAGTAAGTCGTCGTGGTAAATTACTAGGTTATGCAATTC
ACCAACAAATCGAGAATGAGCGTATGAAACAAATGCTTGCAGAACGTCAATTCCCAGAAGAGTATACACAAAGCTTATTC
AACATTACAGAAACATCTTCAAACTTAGATGTAAACAGTGCTTACACAGCATTCCCAGTAGAAAATAAAGAATTATTTGG
TCAAGGTTTAACTACAATCGTACCGATCGTTGGTGGCGGTGAGCGTCTAGGTACATTAGTTTTAGCTCGTCTTGGTCAAG
AGTTCTTAGATGATGATTTAATTCTTGCTGAGTACAGCTCAACTGTTGTAGGTATGGAAATTTTACGTGAAAAAGCAGAA
GAAATCGAAGAAGAAGCACGTAGCAAAGCTGTTGTTCAAATGGCGATCAGCTCATTATCTTACAGTGAATTAGAAGCAAT
CGAGCACATCTTCGAAGAATTAAACGGAACAGAAGGTTTACTTGTTGCAAGTAAAATTGCTGACCGCGTAGGAATCACTC
GTTCGGTAATCGTAAATGCACTTCGTAAATTAGAAAGTGCTGGTGTAATTGAGTCGCGTTCTTTAGGTATGAAAGGAACA
TACATTAAAGTATTAAACGACAAATTCTTACATGAACTTGCTAAATTAAAAACAAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| codY | Bacillus subtilis subsp. subtilis str. 168 |
81.081 |
100 |
0.811 |
| codY | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.667 |
98.456 |
0.459 |